r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
4890791 | 4890795 | 4 | 22 | 18 | 40 | 0 | 7 | 7 | 22 | 25 | 0.39 | 0.15 | 0.47 |
4890791 | 4890810 | 19 | 15 | 11 | 26 | 0 | 3 | 3 | 15 | 14 | 0.35 | 0.10 | 0.48 |
4890791 | 4890835 | 44 | 7 | 3 | 10 | 3 | 0 | 3 | 10 | 3 | -0.30 | 0.23 | 0.23 |
4890791 | 4890843 | 52 | 4 | 6 | 10 | 0 | 3 | 3 | 4 | 9 | 0.36 | 0.23 | 0.31 |
4890791 | 4890847 | 56 | 6 | 3 | 9 | 0 | 3 | 3 | 6 | 6 | 0.58 | 0.25 | 0.50 |
4890791 | 4890852 | 61 | 6 | 2 | 8 | 0 | 3 | 3 | 6 | 5 | 0.67 | 0.27 | 0.45 |
4890795 | 4890810 | 15 | 18 | 6 | 24 | 0 | 15 | 15 | 18 | 21 | 0.73 | 0.38 | 0.46 |
4890795 | 4890835 | 40 | 1 | 3 | 4 | 8 | 0 | 8 | 9 | 3 | -0.82 | 0.33 | 0.25 |
4890795 | 4890843 | 48 | 2 | 4 | 6 | 3 | 5 | 8 | 5 | 9 | -0.04 | 0.43 | 0.36 |
4890795 | 4890847 | 52 | 4 | 2 | 6 | 4 | 3 | 7 | 8 | 5 | 0.10 | 0.46 | 0.38 |
4890795 | 4890852 | 57 | 3 | 2 | 5 | 6 | 2 | 8 | 9 | 4 | -0.16 | 0.38 | 0.31 |
4890810 | 4890829 | 19 | 14 | 5 | 19 | 6 | 5 | 11 | 20 | 10 | 0.20 | 0.37 | 0.33 |
4890810 | 4890835 | 25 | 4 | 6 | 10 | 5 | 1 | 6 | 9 | 7 | -0.42 | 0.38 | 0.44 |
4890829 | 4890835 | 6 | 20 | 4 | 24 | 3 | 11 | 14 | 23 | 15 | 0.61 | 0.37 | 0.39 |
4890829 | 4890843 | 14 | 8 | 9 | 17 | 0 | 12 | 12 | 8 | 21 | 0.52 | 0.41 | 0.28 |
4890829 | 4890847 | 18 | 7 | 5 | 12 | 9 | 2 | 11 | 16 | 7 | -0.26 | 0.48 | 0.30 |
4890829 | 4890852 | 23 | 4 | 5 | 9 | 6 | 2 | 8 | 10 | 7 | -0.31 | 0.47 | 0.41 |
4890835 | 4890843 | 8 | 9 | 15 | 24 | 0 | 14 | 14 | 9 | 29 | 0.42 | 0.37 | 0.24 |
4890835 | 4890847 | 12 | 9 | 9 | 18 | 10 | 4 | 14 | 19 | 13 | -0.22 | 0.44 | 0.41 |
4890835 | 4890852 | 17 | 6 | 9 | 15 | 8 | 3 | 11 | 14 | 12 | -0.32 | 0.42 | 0.46 |
4890843 | 4890847 | 4 | 8 | 0 | 8 | 16 | 14 | 30 | 24 | 14 | 0.39 | 0.21 | 0.37 |
4890843 | 4890852 | 9 | 7 | 0 | 7 | 11 | 14 | 25 | 18 | 14 | 0.47 | 0.22 | 0.44 |
4890847 | 4890852 | 5 | 18 | 3 | 21 | 1 | 12 | 13 | 19 | 15 | 0.76 | 0.38 | 0.44 |
4890889 | 4890895 | 6 | 8 | 0 | 8 | 1 | 5 | 6 | 9 | 5 | 0.86 | 0.43 | 0.36 |
4890889 | 4890898 | 9 | 2 | 5 | 7 | 2 | 4 | 6 | 4 | 9 | -0.05 | 0.46 | 0.31 |
4890895 | 4890898 | 3 | 2 | 7 | 9 | 3 | 4 | 7 | 5 | 11 | -0.22 | 0.44 | 0.31 |
4890895 | 4890904 | 9 | 3 | 4 | 7 | 6 | 0 | 6 | 9 | 4 | -0.62 | 0.46 | 0.31 |
4890898 | 4890904 | 6 | 6 | 0 | 6 | 4 | 5 | 9 | 10 | 5 | 0.58 | 0.40 | 0.33 |
4890898 | 4890913 | 15 | 5 | 0 | 5 | 4 | 3 | 7 | 9 | 3 | 0.49 | 0.42 | 0.25 |
4890904 | 4890913 | 9 | 6 | 2 | 8 | 5 | 1 | 6 | 11 | 3 | -0.10 | 0.43 | 0.21 |
4890904 | 4890917 | 13 | 7 | 0 | 7 | 1 | 4 | 5 | 8 | 4 | 0.84 | 0.42 | 0.33 |
4890904 | 4890919 | 15 | 6 | 0 | 6 | 1 | 4 | 5 | 7 | 4 | 0.83 | 0.45 | 0.36 |
4890913 | 4890917 | 4 | 7 | 6 | 13 | 3 | 0 | 3 | 10 | 6 | -0.37 | 0.19 | 0.38 |
4890913 | 4890919 | 6 | 6 | 6 | 12 | 3 | 0 | 3 | 9 | 6 | -0.41 | 0.20 | 0.40 |
4890917 | 4890919 | 2 | 9 | 0 | 9 | 0 | 6 | 6 | 9 | 6 | 1.00 | 0.40 | 0.40 |
4890987 | 4891010 | 23 | 0 | 4 | 4 | 5 | 25 | 30 | 5 | 29 | -0.15 | 0.12 | 0.15 |
4891010 | 4891016 | 6 | 4 | 9 | 13 | 6 | 54 | 60 | 10 | 63 | 0.23 | 0.18 | 0.14 |
4891010 | 4891024 | 14 | 10 | 0 | 10 | 16 | 32 | 48 | 26 | 32 | 0.51 | 0.17 | 0.45 |
4891010 | 4891039 | 29 | 4 | 0 | 4 | 10 | 8 | 18 | 14 | 8 | 0.36 | 0.18 | 0.36 |
4891010 | 4891102 | 92 | 5 | 2 | 7 | 1 | 10 | 11 | 6 | 12 | 0.65 | 0.39 | 0.33 |
4891016 | 4891024 | 8 | 7 | 4 | 11 | 23 | 33 | 56 | 30 | 37 | 0.17 | 0.16 | 0.45 |
4891016 | 4891039 | 23 | 4 | 0 | 4 | 15 | 12 | 27 | 19 | 12 | 0.31 | 0.13 | 0.39 |
4891016 | 4891102 | 86 | 2 | 2 | 4 | 6 | 14 | 20 | 8 | 16 | 0.16 | 0.17 | 0.33 |
4891024 | 4891039 | 15 | 13 | 0 | 13 | 6 | 12 | 18 | 19 | 12 | 0.68 | 0.42 | 0.39 |
4891024 | 4891102 | 78 | 6 | 4 | 10 | 1 | 12 | 13 | 7 | 16 | 0.56 | 0.43 | 0.30 |
4891039 | 4891102 | 63 | 3 | 5 | 8 | 0 | 6 | 6 | 3 | 11 | 0.45 | 0.43 | 0.21 |
4891075 | 4891099 | 24 | 1 | 9 | 10 | 3 | 23 | 26 | 4 | 32 | -0.02 | 0.28 | 0.11 |
4891075 | 4891102 | 27 | 5 | 5 | 10 | 8 | 18 | 26 | 13 | 23 | 0.18 | 0.28 | 0.36 |
4891075 | 4891106 | 31 | 1 | 7 | 8 | 2 | 11 | 13 | 3 | 18 | -0.04 | 0.38 | 0.14 |
4891075 | 4891147 | 72 | 1 | 5 | 6 | 2 | 3 | 5 | 3 | 8 | -0.26 | 0.45 | 0.27 |
4891075 | 4891165 | 90 | 1 | 4 | 5 | 1 | 5 | 6 | 2 | 9 | 0.04 | 0.45 | 0.18 |
4891099 | 4891102 | 3 | 15 | 1 | 16 | 50 | 68 | 118 | 65 | 69 | 0.33 | 0.12 | 0.49 |
4891099 | 4891106 | 7 | 9 | 6 | 15 | 15 | 89 | 104 | 24 | 95 | 0.38 | 0.13 | 0.20 |
4891099 | 4891119 | 20 | 4 | 5 | 9 | 4 | 53 | 57 | 8 | 58 | 0.39 | 0.14 | 0.12 |
4891099 | 4891165 | 66 | 0 | 3 | 3 | 3 | 14 | 17 | 3 | 17 | -0.18 | 0.15 | 0.15 |
4891102 | 4891106 | 4 | 19 | 55 | 74 | 13 | 56 | 69 | 32 | 111 | 0.08 | 0.48 | 0.22 |
4891102 | 4891119 | 17 | 10 | 39 | 49 | 2 | 39 | 41 | 12 | 78 | 0.23 | 0.46 | 0.13 |
4891102 | 4891126 | 24 | 28 | 4 | 32 | 5 | 20 | 25 | 33 | 24 | 0.68 | 0.44 | 0.42 |
4891102 | 4891147 | 45 | 2 | 4 | 6 | 4 | 6 | 10 | 6 | 10 | -0.07 | 0.38 | 0.38 |
4891102 | 4891165 | 63 | 0 | 14 | 14 | 3 | 7 | 10 | 3 | 21 | -0.45 | 0.42 | 0.12 |
4891106 | 4891119 | 13 | 11 | 13 | 24 | 1 | 69 | 70 | 12 | 82 | 0.58 | 0.26 | 0.13 |
4891106 | 4891126 | 20 | 10 | 5 | 15 | 28 | 18 | 46 | 38 | 23 | 0.05 | 0.25 | 0.38 |
4891106 | 4891147 | 41 | 0 | 2 | 2 | 5 | 7 | 12 | 5 | 9 | -0.30 | 0.14 | 0.36 |
4891126 | 4891147 | 21 | 28 | 15 | 43 | 4 | 27 | 31 | 32 | 42 | 0.52 | 0.42 | 0.43 |
4891126 | 4891174 | 48 | 3 | 14 | 17 | 1 | 4 | 5 | 4 | 18 | -0.03 | 0.23 | 0.18 |
4891126 | 4891196 | 70 | 5 | 11 | 16 | 0 | 10 | 10 | 5 | 21 | 0.39 | 0.38 | 0.19 |
4891126 | 4891204 | 78 | 7 | 6 | 13 | 0 | 7 | 7 | 7 | 13 | 0.54 | 0.35 | 0.35 |
4891147 | 4891165 | 18 | 10 | 10 | 20 | 4 | 41 | 45 | 14 | 51 | 0.46 | 0.31 | 0.22 |
4891147 | 4891174 | 27 | 6 | 4 | 10 | 4 | 28 | 32 | 10 | 32 | 0.47 | 0.24 | 0.24 |
4891147 | 4891196 | 49 | 7 | 2 | 9 | 1 | 27 | 28 | 8 | 29 | 0.77 | 0.24 | 0.22 |
4891147 | 4891204 | 57 | 9 | 0 | 9 | 2 | 26 | 28 | 11 | 26 | 0.87 | 0.24 | 0.30 |
4891147 | 4891229 | 82 | 1 | 2 | 3 | 1 | 11 | 12 | 2 | 13 | 0.29 | 0.20 | 0.13 |
4891165 | 4891174 | 9 | 14 | 2 | 16 | 5 | 68 | 73 | 19 | 70 | 0.76 | 0.18 | 0.21 |
4891165 | 4891196 | 31 | 5 | 1 | 6 | 1 | 31 | 32 | 6 | 32 | 0.80 | 0.16 | 0.16 |
4891165 | 4891204 | 39 | 2 | 1 | 3 | 3 | 14 | 17 | 5 | 15 | 0.40 | 0.15 | 0.25 |
4891165 | 4891229 | 64 | 3 | 0 | 3 | 4 | 22 | 26 | 7 | 22 | 0.60 | 0.10 | 0.24 |
4891174 | 4891196 | 22 | 4 | 8 | 12 | 3 | 54 | 57 | 7 | 62 | 0.35 | 0.17 | 0.10 |
4891174 | 4891204 | 30 | 3 | 4 | 7 | 4 | 30 | 34 | 7 | 34 | 0.31 | 0.17 | 0.17 |
4891174 | 4891229 | 55 | 3 | 1 | 4 | 5 | 25 | 30 | 8 | 26 | 0.44 | 0.12 | 0.24 |
4891196 | 4891204 | 8 | 27 | 1 | 28 | 16 | 89 | 105 | 43 | 90 | 0.71 | 0.21 | 0.32 |
4891196 | 4891229 | 33 | 2 | 2 | 4 | 7 | 22 | 29 | 9 | 24 | 0.19 | 0.12 | 0.27 |
4891196 | 4891240 | 44 | 5 | 0 | 5 | 3 | 12 | 15 | 8 | 12 | 0.71 | 0.25 | 0.40 |
4891196 | 4891256 | 60 | 6 | 2 | 8 | 6 | 11 | 17 | 12 | 13 | 0.37 | 0.32 | 0.48 |
4891204 | 4891229 | 25 | 2 | 11 | 13 | 12 | 38 | 50 | 14 | 49 | -0.08 | 0.21 | 0.22 |
4891204 | 4891240 | 36 | 3 | 2 | 5 | 0 | 7 | 7 | 3 | 9 | 0.68 | 0.42 | 0.25 |
4891204 | 4891256 | 52 | 8 | 3 | 11 | 1 | 11 | 12 | 9 | 14 | 0.66 | 0.48 | 0.39 |
4891229 | 4891240 | 11 | 19 | 16 | 35 | 31 | 52 | 83 | 50 | 68 | 0.16 | 0.30 | 0.42 |
4891229 | 4891256 | 27 | 7 | 7 | 14 | 15 | 25 | 40 | 22 | 32 | 0.11 | 0.26 | 0.41 |
4891240 | 4891256 | 16 | 37 | 7 | 44 | 4 | 52 | 56 | 41 | 59 | 0.78 | 0.44 | 0.41 |