r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
3589855 | 3589870 | 15 | 8 | 0 | 8 | 0 | 7 | 7 | 8 | 7 | 1.00 | 0.47 | 0.47 |
3589855 | 3589872 | 17 | 7 | 0 | 7 | 2 | 5 | 7 | 9 | 5 | 0.74 | 0.50 | 0.36 |
3589855 | 3589909 | 54 | 9 | 1 | 10 | 0 | 2 | 2 | 9 | 3 | 0.78 | 0.17 | 0.25 |
3589855 | 3589919 | 64 | 9 | 3 | 12 | 2 | 0 | 2 | 11 | 3 | -0.21 | 0.14 | 0.21 |
3589855 | 3589923 | 68 | 7 | 4 | 11 | 2 | 0 | 2 | 9 | 4 | -0.28 | 0.15 | 0.31 |
3589870 | 3589872 | 2 | 13 | 0 | 13 | 5 | 8 | 13 | 18 | 8 | 0.67 | 0.50 | 0.31 |
3589870 | 3589878 | 8 | 12 | 0 | 12 | 0 | 8 | 8 | 12 | 8 | 1.00 | 0.40 | 0.40 |
3589870 | 3589881 | 11 | 11 | 1 | 12 | 0 | 7 | 7 | 11 | 8 | 0.90 | 0.37 | 0.42 |
3589870 | 3589892 | 22 | 6 | 0 | 6 | 0 | 5 | 5 | 6 | 5 | 1.00 | 0.45 | 0.45 |
3589870 | 3589932 | 62 | 6 | 3 | 9 | 2 | 0 | 2 | 8 | 3 | -0.29 | 0.18 | 0.27 |
3589872 | 3589878 | 6 | 12 | 3 | 15 | 0 | 5 | 5 | 12 | 8 | 0.71 | 0.25 | 0.40 |
3589872 | 3589881 | 9 | 11 | 3 | 14 | 0 | 5 | 5 | 11 | 8 | 0.70 | 0.26 | 0.42 |
3589872 | 3589892 | 20 | 6 | 2 | 8 | 0 | 3 | 3 | 6 | 5 | 0.67 | 0.27 | 0.45 |
3589878 | 3589881 | 3 | 15 | 1 | 16 | 0 | 9 | 9 | 15 | 10 | 0.92 | 0.36 | 0.40 |
3589878 | 3589892 | 14 | 10 | 0 | 10 | 0 | 9 | 9 | 10 | 9 | 1.00 | 0.47 | 0.47 |
3589878 | 3589896 | 18 | 8 | 0 | 8 | 5 | 4 | 9 | 13 | 4 | 0.52 | 0.47 | 0.24 |
3589878 | 3589898 | 20 | 7 | 0 | 7 | 2 | 6 | 8 | 9 | 6 | 0.76 | 0.47 | 0.40 |
3589878 | 3589909 | 31 | 7 | 0 | 7 | 0 | 5 | 5 | 7 | 5 | 1.00 | 0.42 | 0.42 |
3589878 | 3589932 | 54 | 7 | 2 | 9 | 2 | 0 | 2 | 9 | 2 | -0.22 | 0.18 | 0.18 |
3589881 | 3589892 | 11 | 12 | 1 | 13 | 1 | 8 | 9 | 13 | 9 | 0.81 | 0.41 | 0.41 |
3589881 | 3589896 | 15 | 10 | 1 | 11 | 6 | 3 | 9 | 16 | 4 | 0.30 | 0.45 | 0.20 |
3589881 | 3589898 | 17 | 9 | 1 | 10 | 3 | 5 | 8 | 12 | 6 | 0.55 | 0.44 | 0.33 |
3589881 | 3589909 | 28 | 11 | 0 | 11 | 0 | 4 | 4 | 11 | 4 | 1.00 | 0.27 | 0.27 |
3589881 | 3589932 | 51 | 7 | 2 | 9 | 2 | 0 | 2 | 9 | 2 | -0.22 | 0.18 | 0.18 |
3589892 | 3589896 | 4 | 27 | 0 | 27 | 6 | 6 | 12 | 33 | 6 | 0.64 | 0.31 | 0.15 |
3589892 | 3589898 | 6 | 26 | 0 | 26 | 3 | 8 | 11 | 29 | 8 | 0.81 | 0.30 | 0.22 |
3589892 | 3589909 | 17 | 22 | 0 | 22 | 1 | 6 | 7 | 23 | 6 | 0.91 | 0.24 | 0.21 |
3589896 | 3589898 | 2 | 45 | 3 | 48 | 0 | 8 | 8 | 45 | 11 | 0.83 | 0.14 | 0.20 |
3589896 | 3589909 | 13 | 36 | 5 | 41 | 1 | 6 | 7 | 37 | 11 | 0.62 | 0.15 | 0.23 |
3589896 | 3589923 | 27 | 22 | 4 | 26 | 2 | 1 | 3 | 24 | 5 | 0.14 | 0.10 | 0.17 |
3589896 | 3589929 | 33 | 10 | 3 | 13 | 2 | 0 | 2 | 12 | 3 | -0.20 | 0.13 | 0.20 |
3589898 | 3589909 | 11 | 39 | 3 | 42 | 1 | 9 | 10 | 40 | 12 | 0.78 | 0.19 | 0.23 |
3589898 | 3589919 | 21 | 29 | 6 | 35 | 2 | 2 | 4 | 31 | 8 | 0.25 | 0.10 | 0.21 |
3589898 | 3589923 | 25 | 23 | 6 | 29 | 3 | 1 | 4 | 26 | 7 | 0.03 | 0.12 | 0.21 |
3589898 | 3589929 | 31 | 11 | 5 | 16 | 3 | 0 | 3 | 14 | 5 | -0.26 | 0.16 | 0.26 |
3589909 | 3589919 | 10 | 51 | 10 | 61 | 10 | 4 | 14 | 61 | 14 | 0.12 | 0.19 | 0.19 |
3589909 | 3589923 | 14 | 42 | 13 | 55 | 11 | 3 | 14 | 53 | 16 | -0.02 | 0.20 | 0.23 |
3589909 | 3589929 | 20 | 31 | 11 | 42 | 11 | 1 | 12 | 42 | 12 | -0.18 | 0.22 | 0.22 |
3589909 | 3589932 | 23 | 21 | 10 | 31 | 9 | 0 | 9 | 30 | 10 | -0.31 | 0.23 | 0.25 |
3589919 | 3589923 | 4 | 54 | 4 | 58 | 2 | 14 | 16 | 56 | 18 | 0.77 | 0.22 | 0.24 |
3589919 | 3589929 | 10 | 43 | 3 | 46 | 2 | 11 | 13 | 45 | 14 | 0.76 | 0.22 | 0.24 |
3589919 | 3589932 | 13 | 33 | 2 | 35 | 0 | 10 | 10 | 33 | 12 | 0.89 | 0.22 | 0.27 |
3589923 | 3589929 | 6 | 43 | 3 | 46 | 4 | 11 | 15 | 47 | 14 | 0.68 | 0.25 | 0.23 |
3589923 | 3589932 | 9 | 35 | 0 | 35 | 1 | 12 | 13 | 36 | 12 | 0.95 | 0.27 | 0.25 |
3589929 | 3589932 | 3 | 39 | 2 | 41 | 1 | 11 | 12 | 40 | 13 | 0.84 | 0.23 | 0.25 |
3589929 | 3589947 | 18 | 8 | 1 | 9 | 1 | 1 | 2 | 9 | 2 | 0.39 | 0.18 | 0.18 |
3589929 | 3589949 | 20 | 8 | 1 | 9 | 1 | 1 | 2 | 9 | 2 | 0.39 | 0.18 | 0.18 |
3589947 | 3589949 | 2 | 25 | 3 | 28 | 4 | 4 | 8 | 29 | 7 | 0.41 | 0.22 | 0.19 |
3589947 | 3589972 | 25 | 12 | 4 | 16 | 4 | 2 | 6 | 16 | 6 | 0.08 | 0.27 | 0.27 |
3589949 | 3589972 | 23 | 16 | 2 | 18 | 2 | 4 | 6 | 18 | 6 | 0.56 | 0.25 | 0.25 |