r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
52709695 | 52709710 | 15 | 2659 | 198 | 2857 | 230 | 173 | 403 | 2889 | 371 | 0.37 | 0.12 | 0.11 |
52709695 | 52709716 | 21 | 1570 | 161 | 1731 | 137 | 92 | 229 | 1707 | 253 | 0.30 | 0.12 | 0.13 |
52709695 | 52709721 | 26 | 1177 | 137 | 1314 | 73 | 95 | 168 | 1250 | 232 | 0.40 | 0.11 | 0.16 |
52709695 | 52709726 | 31 | 760 | 105 | 865 | 11 | 93 | 104 | 771 | 198 | 0.59 | 0.11 | 0.20 |
52709695 | 52709732 | 37 | 328 | 39 | 367 | 21 | 37 | 58 | 349 | 76 | 0.48 | 0.14 | 0.18 |
52709695 | 52709734 | 39 | 123 | 12 | 135 | 4 | 21 | 25 | 127 | 33 | 0.67 | 0.16 | 0.21 |
52709710 | 52709716 | 6 | 2655 | 152 | 2807 | 95 | 255 | 350 | 2750 | 407 | 0.63 | 0.11 | 0.13 |
52709710 | 52709721 | 11 | 2211 | 159 | 2370 | 49 | 255 | 304 | 2260 | 414 | 0.68 | 0.11 | 0.15 |
52709710 | 52709726 | 16 | 1724 | 210 | 1934 | 18 | 216 | 234 | 1742 | 426 | 0.64 | 0.11 | 0.20 |
52709710 | 52709732 | 22 | 1274 | 158 | 1432 | 56 | 133 | 189 | 1330 | 291 | 0.50 | 0.12 | 0.18 |
52709710 | 52709734 | 24 | 1104 | 95 | 1199 | 16 | 143 | 159 | 1120 | 238 | 0.69 | 0.12 | 0.18 |
52709710 | 52709738 | 28 | 777 | 83 | 860 | 10 | 87 | 97 | 787 | 170 | 0.63 | 0.10 | 0.18 |
52709716 | 52709721 | 5 | 2517 | 154 | 2671 | 80 | 316 | 396 | 2597 | 470 | 0.69 | 0.13 | 0.15 |
52709716 | 52709726 | 10 | 2033 | 206 | 2239 | 34 | 293 | 327 | 2067 | 499 | 0.68 | 0.13 | 0.19 |
52709716 | 52709732 | 16 | 1605 | 152 | 1757 | 53 | 205 | 258 | 1658 | 357 | 0.62 | 0.13 | 0.18 |
52709716 | 52709734 | 18 | 1399 | 123 | 1522 | 58 | 170 | 228 | 1457 | 293 | 0.60 | 0.13 | 0.17 |
52709716 | 52709738 | 22 | 1087 | 104 | 1191 | 25 | 136 | 161 | 1112 | 240 | 0.64 | 0.12 | 0.18 |
52709716 | 52709753 | 37 | 179 | 19 | 198 | 2 | 31 | 33 | 181 | 50 | 0.72 | 0.14 | 0.22 |
52709721 | 52709726 | 5 | 2316 | 175 | 2491 | 64 | 379 | 443 | 2380 | 554 | 0.72 | 0.15 | 0.19 |
52709721 | 52709732 | 11 | 1873 | 147 | 2020 | 95 | 269 | 364 | 1968 | 416 | 0.63 | 0.15 | 0.17 |
52709721 | 52709734 | 13 | 1677 | 117 | 1794 | 94 | 231 | 325 | 1771 | 348 | 0.63 | 0.15 | 0.16 |
52709721 | 52709738 | 17 | 1372 | 94 | 1466 | 47 | 206 | 253 | 1419 | 300 | 0.70 | 0.15 | 0.17 |
52709721 | 52709753 | 32 | 468 | 40 | 508 | 11 | 82 | 93 | 479 | 122 | 0.72 | 0.15 | 0.20 |
52709726 | 52709732 | 6 | 2421 | 71 | 2492 | 81 | 477 | 558 | 2502 | 548 | 0.83 | 0.18 | 0.18 |
52709726 | 52709734 | 8 | 2198 | 80 | 2278 | 136 | 372 | 508 | 2334 | 452 | 0.73 | 0.18 | 0.16 |
52709726 | 52709738 | 12 | 1869 | 111 | 1980 | 70 | 341 | 411 | 1939 | 452 | 0.74 | 0.17 | 0.19 |
52709726 | 52709753 | 27 | 967 | 85 | 1052 | 12 | 200 | 212 | 979 | 285 | 0.77 | 0.17 | 0.23 |
52709732 | 52709734 | 2 | 2628 | 107 | 2735 | 177 | 418 | 595 | 2805 | 525 | 0.70 | 0.18 | 0.16 |
52709732 | 52709738 | 6 | 2285 | 137 | 2422 | 82 | 436 | 518 | 2367 | 573 | 0.76 | 0.18 | 0.19 |
52709732 | 52709753 | 21 | 1387 | 104 | 1491 | 15 | 313 | 328 | 1402 | 417 | 0.81 | 0.18 | 0.23 |
52709734 | 52709738 | 4 | 2464 | 193 | 2657 | 43 | 443 | 486 | 2507 | 636 | 0.76 | 0.15 | 0.20 |
52709734 | 52709753 | 19 | 1518 | 191 | 1709 | 16 | 294 | 310 | 1534 | 485 | 0.71 | 0.15 | 0.24 |
52709738 | 52709751 | 13 | 2047 | 43 | 2090 | 403 | 234 | 637 | 2450 | 277 | 0.49 | 0.23 | 0.10 |
52709738 | 52709753 | 15 | 1876 | 84 | 1960 | 28 | 587 | 615 | 1904 | 671 | 0.89 | 0.24 | 0.26 |
52709751 | 52709753 | 2 | 2772 | 577 | 3349 | 31 | 354 | 385 | 2803 | 931 | 0.53 | 0.10 | 0.25 |
52709795 | 52709805 | 10 | 2564 | 35 | 2599 | 75 | 691 | 766 | 2639 | 726 | 0.91 | 0.23 | 0.22 |
52709795 | 52709807 | 12 | 2439 | 36 | 2475 | 52 | 672 | 724 | 2491 | 708 | 0.92 | 0.23 | 0.22 |
52709795 | 52709810 | 15 | 2293 | 42 | 2335 | 53 | 626 | 679 | 2346 | 668 | 0.91 | 0.23 | 0.22 |
52709795 | 52709813 | 18 | 2028 | 17 | 2045 | 67 | 536 | 603 | 2095 | 553 | 0.91 | 0.23 | 0.21 |
52709795 | 52709816 | 21 | 1735 | 22 | 1757 | 36 | 461 | 497 | 1771 | 483 | 0.93 | 0.22 | 0.21 |
52709795 | 52709821 | 26 | 1258 | 12 | 1270 | 120 | 228 | 348 | 1378 | 240 | 0.75 | 0.22 | 0.15 |
52709795 | 52709827 | 32 | 816 | 25 | 841 | 21 | 224 | 245 | 837 | 249 | 0.88 | 0.23 | 0.23 |
52709795 | 52709833 | 38 | 183 | 8 | 191 | 12 | 65 | 77 | 195 | 73 | 0.81 | 0.29 | 0.27 |
52709795 | 52709835 | 40 | 47 | 1 | 48 | 7 | 22 | 29 | 54 | 23 | 0.78 | 0.38 | 0.30 |
52709805 | 52709807 | 2 | 3349 | 55 | 3404 | 33 | 911 | 944 | 3382 | 966 | 0.94 | 0.22 | 0.22 |
52709805 | 52709810 | 5 | 3206 | 62 | 3268 | 27 | 877 | 904 | 3233 | 939 | 0.94 | 0.22 | 0.23 |
52709805 | 52709813 | 8 | 2947 | 24 | 2971 | 62 | 772 | 834 | 3009 | 796 | 0.93 | 0.22 | 0.21 |
52709805 | 52709816 | 11 | 2640 | 36 | 2676 | 27 | 706 | 733 | 2667 | 742 | 0.95 | 0.22 | 0.22 |
52709805 | 52709821 | 16 | 2163 | 18 | 2181 | 200 | 387 | 587 | 2363 | 405 | 0.75 | 0.21 | 0.15 |
52709805 | 52709827 | 22 | 1706 | 43 | 1749 | 15 | 469 | 484 | 1721 | 512 | 0.93 | 0.22 | 0.23 |
52709805 | 52709833 | 28 | 1063 | 24 | 1087 | 32 | 291 | 323 | 1095 | 315 | 0.89 | 0.23 | 0.22 |
52709805 | 52709835 | 30 | 916 | 20 | 936 | 39 | 233 | 272 | 955 | 253 | 0.86 | 0.23 | 0.21 |
52709807 | 52709810 | 3 | 3385 | 57 | 3442 | 44 | 947 | 991 | 3429 | 1004 | 0.94 | 0.22 | 0.23 |
52709807 | 52709813 | 6 | 3119 | 24 | 3143 | 95 | 831 | 926 | 3214 | 855 | 0.92 | 0.23 | 0.21 |
52709807 | 52709816 | 9 | 2822 | 29 | 2851 | 44 | 780 | 824 | 2866 | 809 | 0.94 | 0.22 | 0.22 |
52709807 | 52709821 | 14 | 2355 | 16 | 2371 | 240 | 431 | 671 | 2595 | 447 | 0.74 | 0.22 | 0.15 |
52709807 | 52709827 | 20 | 1892 | 45 | 1937 | 29 | 540 | 569 | 1921 | 585 | 0.92 | 0.23 | 0.23 |
52709807 | 52709833 | 26 | 1251 | 28 | 1279 | 39 | 362 | 401 | 1290 | 390 | 0.89 | 0.24 | 0.23 |
52709807 | 52709835 | 28 | 1109 | 22 | 1131 | 57 | 294 | 351 | 1166 | 316 | 0.85 | 0.24 | 0.21 |
52709810 | 52709813 | 3 | 3346 | 22 | 3368 | 102 | 918 | 1020 | 3448 | 940 | 0.92 | 0.23 | 0.21 |
52709810 | 52709816 | 6 | 3042 | 29 | 3071 | 52 | 862 | 914 | 3094 | 891 | 0.94 | 0.23 | 0.22 |
52709810 | 52709821 | 11 | 2567 | 18 | 2585 | 288 | 472 | 760 | 2855 | 490 | 0.73 | 0.23 | 0.15 |
52709810 | 52709827 | 17 | 2107 | 43 | 2150 | 37 | 624 | 661 | 2144 | 667 | 0.92 | 0.24 | 0.24 |
52709810 | 52709833 | 23 | 1464 | 32 | 1496 | 48 | 441 | 489 | 1512 | 473 | 0.89 | 0.25 | 0.24 |
52709810 | 52709835 | 25 | 1327 | 22 | 1349 | 70 | 372 | 442 | 1397 | 394 | 0.86 | 0.25 | 0.22 |
52709810 | 52709848 | 38 | 211 | 9 | 220 | 4 | 72 | 76 | 215 | 81 | 0.89 | 0.26 | 0.27 |
52709813 | 52709816 | 3 | 3308 | 90 | 3398 | 29 | 893 | 922 | 3337 | 983 | 0.92 | 0.21 | 0.23 |
52709813 | 52709821 | 8 | 2832 | 77 | 2909 | 300 | 478 | 778 | 3132 | 555 | 0.67 | 0.21 | 0.15 |
52709813 | 52709827 | 14 | 2374 | 103 | 2477 | 25 | 656 | 681 | 2399 | 759 | 0.89 | 0.22 | 0.24 |
52709813 | 52709833 | 20 | 1735 | 69 | 1804 | 36 | 496 | 532 | 1771 | 565 | 0.88 | 0.23 | 0.24 |
52709813 | 52709835 | 22 | 1591 | 64 | 1655 | 72 | 413 | 485 | 1663 | 477 | 0.82 | 0.23 | 0.22 |
52709813 | 52709848 | 35 | 465 | 22 | 487 | 8 | 151 | 159 | 473 | 173 | 0.88 | 0.25 | 0.27 |
52709813 | 52709852 | 39 | 102 | 3 | 105 | 5 | 24 | 29 | 107 | 27 | 0.82 | 0.22 | 0.20 |
52709816 | 52709821 | 5 | 3127 | 22 | 3149 | 328 | 592 | 920 | 3455 | 614 | 0.74 | 0.23 | 0.15 |
52709816 | 52709827 | 11 | 2656 | 59 | 2715 | 29 | 789 | 818 | 2685 | 848 | 0.93 | 0.23 | 0.24 |
52709816 | 52709833 | 17 | 2005 | 49 | 2054 | 48 | 608 | 656 | 2053 | 657 | 0.90 | 0.24 | 0.24 |
52709816 | 52709835 | 19 | 1862 | 40 | 1902 | 84 | 523 | 607 | 1946 | 563 | 0.86 | 0.24 | 0.22 |
52709816 | 52709848 | 32 | 747 | 22 | 769 | 12 | 244 | 256 | 759 | 266 | 0.91 | 0.25 | 0.26 |
52709816 | 52709852 | 36 | 380 | 10 | 390 | 11 | 109 | 120 | 391 | 119 | 0.89 | 0.24 | 0.23 |
52709821 | 52709827 | 6 | 3020 | 368 | 3388 | 36 | 595 | 631 | 3056 | 963 | 0.71 | 0.16 | 0.24 |
52709821 | 52709833 | 12 | 2384 | 316 | 2700 | 47 | 458 | 505 | 2431 | 774 | 0.67 | 0.16 | 0.24 |
52709821 | 52709835 | 14 | 2255 | 276 | 2531 | 87 | 389 | 476 | 2342 | 665 | 0.62 | 0.16 | 0.22 |
52709821 | 52709848 | 27 | 1117 | 162 | 1279 | 20 | 224 | 244 | 1137 | 386 | 0.67 | 0.16 | 0.25 |
52709821 | 52709852 | 31 | 748 | 104 | 852 | 25 | 134 | 159 | 773 | 238 | 0.62 | 0.16 | 0.24 |
52709827 | 52709833 | 6 | 2802 | 63 | 2865 | 82 | 837 | 919 | 2884 | 900 | 0.90 | 0.24 | 0.24 |
52709827 | 52709835 | 8 | 2666 | 51 | 2717 | 137 | 733 | 870 | 2803 | 784 | 0.85 | 0.24 | 0.22 |
52709827 | 52709848 | 21 | 1548 | 43 | 1591 | 30 | 477 | 507 | 1578 | 520 | 0.91 | 0.24 | 0.25 |
52709827 | 52709852 | 25 | 1183 | 32 | 1215 | 40 | 329 | 369 | 1223 | 361 | 0.87 | 0.23 | 0.23 |
52709833 | 52709835 | 2 | 3143 | 56 | 3199 | 137 | 835 | 972 | 3280 | 891 | 0.87 | 0.23 | 0.21 |
52709833 | 52709848 | 15 | 2000 | 65 | 2065 | 41 | 587 | 628 | 2041 | 652 | 0.89 | 0.23 | 0.24 |
52709833 | 52709852 | 19 | 1644 | 47 | 1691 | 48 | 437 | 485 | 1692 | 484 | 0.87 | 0.22 | 0.22 |
52709835 | 52709848 | 13 | 2102 | 115 | 2217 | 35 | 557 | 592 | 2137 | 672 | 0.85 | 0.21 | 0.24 |
52709835 | 52709852 | 17 | 1744 | 82 | 1826 | 40 | 424 | 464 | 1784 | 506 | 0.84 | 0.20 | 0.22 |
52709848 | 52709852 | 4 | 2799 | 52 | 2851 | 84 | 656 | 740 | 2883 | 708 | 0.88 | 0.21 | 0.20 |
52709848 | 52709879 | 31 | 772 | 27 | 799 | 19 | 133 | 152 | 791 | 160 | 0.82 | 0.16 | 0.17 |
52709848 | 52709882 | 34 | 371 | 3 | 374 | 8 | 49 | 57 | 379 | 52 | 0.89 | 0.13 | 0.12 |
52709852 | 52709879 | 27 | 926 | 41 | 967 | 21 | 139 | 160 | 947 | 180 | 0.79 | 0.14 | 0.16 |
52709852 | 52709882 | 30 | 532 | 8 | 540 | 12 | 61 | 73 | 544 | 69 | 0.84 | 0.12 | 0.11 |
52709879 | 52709882 | 3 | 1452 | 6 | 1458 | 38 | 206 | 244 | 1490 | 212 | 0.89 | 0.14 | 0.12 |
52709925 | 52709932 | 7 | 73 | 4 | 77 | 2 | 32 | 34 | 75 | 36 | 0.88 | 0.31 | 0.32 |
52709925 | 52709935 | 10 | 59 | 2 | 61 | 2 | 28 | 30 | 61 | 30 | 0.90 | 0.33 | 0.33 |
52709925 | 52709947 | 22 | 39 | 0 | 39 | 3 | 15 | 18 | 42 | 15 | 0.88 | 0.32 | 0.26 |
52709925 | 52709950 | 25 | 32 | 0 | 32 | 6 | 11 | 17 | 38 | 11 | 0.74 | 0.35 | 0.22 |
52709925 | 52709962 | 37 | 8 | 0 | 8 | 2 | 6 | 8 | 10 | 6 | 0.78 | 0.50 | 0.38 |
52709932 | 52709935 | 3 | 76 | 4 | 80 | 6 | 36 | 42 | 82 | 40 | 0.82 | 0.34 | 0.33 |
52709932 | 52709947 | 15 | 61 | 1 | 62 | 5 | 24 | 29 | 66 | 25 | 0.85 | 0.32 | 0.27 |
52709932 | 52709950 | 18 | 54 | 0 | 54 | 11 | 18 | 29 | 65 | 18 | 0.72 | 0.35 | 0.22 |
52709932 | 52709962 | 30 | 29 | 0 | 29 | 1 | 17 | 18 | 30 | 17 | 0.95 | 0.38 | 0.36 |
52709935 | 52709947 | 12 | 70 | 0 | 70 | 3 | 27 | 30 | 73 | 27 | 0.93 | 0.30 | 0.27 |
52709935 | 52709950 | 15 | 61 | 3 | 64 | 13 | 17 | 30 | 74 | 20 | 0.59 | 0.32 | 0.21 |
52709935 | 52709962 | 27 | 36 | 3 | 39 | 2 | 17 | 19 | 38 | 20 | 0.81 | 0.33 | 0.34 |
52709947 | 52709950 | 3 | 95 | 8 | 103 | 12 | 32 | 44 | 107 | 40 | 0.67 | 0.30 | 0.27 |
52709947 | 52709962 | 15 | 67 | 7 | 74 | 1 | 35 | 36 | 68 | 42 | 0.85 | 0.33 | 0.38 |
52709947 | 52709978 | 31 | 22 | 4 | 26 | 0 | 13 | 13 | 22 | 17 | 0.80 | 0.33 | 0.44 |
52709950 | 52709962 | 12 | 72 | 14 | 86 | 2 | 33 | 35 | 74 | 47 | 0.73 | 0.29 | 0.39 |
52709950 | 52709978 | 28 | 27 | 3 | 30 | 0 | 18 | 18 | 27 | 21 | 0.88 | 0.38 | 0.44 |
52709962 | 52709978 | 16 | 41 | 0 | 41 | 0 | 28 | 28 | 41 | 28 | 1.00 | 0.41 | 0.41 |