r2 Matrix (?)
CpG Pair 1 | CpG Pair 2 | Distance | TT Count | TC Count | T* Count | CT Count | CC Count | C* Count | *T Count | *C Count | R Value | mafA | mafB |
6753245 | 6753250 | 5 | 5 | 1 | 6 | 0 | 6 | 6 | 5 | 7 | 0.84 | 0.50 | 0.42 |
6753272 | 6753274 | 2 | 3 | 2 | 5 | 6 | 4 | 10 | 9 | 6 | 0.00 | 0.33 | 0.40 |
6753290 | 6753292 | 2 | 3 | 0 | 3 | 0 | 23 | 23 | 3 | 23 | 1.00 | 0.12 | 0.12 |
6753290 | 6753296 | 6 | 3 | 0 | 3 | 7 | 14 | 21 | 10 | 14 | 0.45 | 0.12 | 0.42 |
6753290 | 6753302 | 12 | 2 | 0 | 2 | 8 | 9 | 17 | 10 | 9 | 0.33 | 0.11 | 0.47 |
6753290 | 6753315 | 25 | 2 | 0 | 2 | 1 | 12 | 13 | 3 | 12 | 0.78 | 0.13 | 0.20 |
6753292 | 6753296 | 4 | 3 | 0 | 3 | 9 | 17 | 26 | 12 | 17 | 0.40 | 0.10 | 0.41 |
6753292 | 6753315 | 23 | 2 | 0 | 2 | 1 | 16 | 17 | 3 | 16 | 0.79 | 0.11 | 0.16 |
6753296 | 6753302 | 6 | 8 | 3 | 11 | 6 | 8 | 14 | 14 | 11 | 0.30 | 0.44 | 0.44 |
6753296 | 6753304 | 8 | 3 | 8 | 11 | 0 | 15 | 15 | 3 | 23 | 0.42 | 0.42 | 0.12 |
6753296 | 6753315 | 19 | 4 | 4 | 8 | 0 | 13 | 13 | 4 | 17 | 0.62 | 0.38 | 0.19 |
6753302 | 6753304 | 2 | 4 | 15 | 19 | 0 | 11 | 11 | 4 | 26 | 0.30 | 0.37 | 0.13 |
6753302 | 6753315 | 13 | 5 | 12 | 17 | 0 | 8 | 8 | 5 | 20 | 0.34 | 0.32 | 0.20 |
6753302 | 6753326 | 24 | 2 | 9 | 11 | 0 | 6 | 6 | 2 | 15 | 0.27 | 0.35 | 0.12 |
6753304 | 6753315 | 11 | 4 | 0 | 4 | 1 | 26 | 27 | 5 | 26 | 0.88 | 0.13 | 0.16 |
6753315 | 6753326 | 11 | 4 | 0 | 4 | 1 | 33 | 34 | 5 | 33 | 0.88 | 0.11 | 0.13 |
6753315 | 6753335 | 20 | 3 | 0 | 3 | 14 | 9 | 23 | 17 | 9 | 0.26 | 0.12 | 0.35 |
6753315 | 6753346 | 31 | 2 | 0 | 2 | 1 | 12 | 13 | 3 | 12 | 0.78 | 0.13 | 0.20 |
6753326 | 6753335 | 9 | 6 | 1 | 7 | 12 | 11 | 23 | 18 | 12 | 0.29 | 0.23 | 0.40 |
6753326 | 6753338 | 12 | 4 | 2 | 6 | 1 | 22 | 23 | 5 | 24 | 0.67 | 0.21 | 0.17 |
6753326 | 6753340 | 14 | 5 | 1 | 6 | 8 | 14 | 22 | 13 | 15 | 0.39 | 0.21 | 0.46 |
6753326 | 6753342 | 16 | 4 | 2 | 6 | 1 | 19 | 20 | 5 | 21 | 0.66 | 0.23 | 0.19 |
6753326 | 6753346 | 20 | 4 | 1 | 5 | 1 | 13 | 14 | 5 | 14 | 0.73 | 0.26 | 0.26 |
6753326 | 6753349 | 23 | 3 | 1 | 4 | 0 | 12 | 12 | 3 | 13 | 0.83 | 0.25 | 0.19 |
6753335 | 6753338 | 3 | 7 | 15 | 22 | 0 | 15 | 15 | 7 | 30 | 0.40 | 0.41 | 0.19 |
6753335 | 6753340 | 5 | 13 | 8 | 21 | 2 | 13 | 15 | 15 | 21 | 0.49 | 0.42 | 0.42 |
6753335 | 6753342 | 7 | 6 | 14 | 20 | 0 | 14 | 14 | 6 | 28 | 0.39 | 0.41 | 0.18 |
6753335 | 6753346 | 11 | 5 | 10 | 15 | 1 | 11 | 12 | 6 | 21 | 0.30 | 0.44 | 0.22 |
6753335 | 6753349 | 14 | 5 | 8 | 13 | 1 | 9 | 10 | 6 | 17 | 0.32 | 0.43 | 0.26 |
6753335 | 6753352 | 17 | 5 | 3 | 8 | 2 | 7 | 9 | 7 | 10 | 0.41 | 0.47 | 0.41 |
6753335 | 6753359 | 24 | 4 | 2 | 6 | 5 | 1 | 6 | 9 | 3 | -0.19 | 0.50 | 0.25 |
6753335 | 6753361 | 26 | 3 | 3 | 6 | 1 | 4 | 5 | 4 | 7 | 0.31 | 0.45 | 0.36 |
6753338 | 6753340 | 2 | 5 | 2 | 7 | 11 | 20 | 31 | 16 | 22 | 0.28 | 0.18 | 0.42 |
6753338 | 6753342 | 4 | 5 | 2 | 7 | 1 | 28 | 29 | 6 | 30 | 0.72 | 0.19 | 0.17 |
6753338 | 6753346 | 8 | 5 | 2 | 7 | 1 | 21 | 22 | 6 | 23 | 0.71 | 0.24 | 0.21 |
6753338 | 6753349 | 11 | 4 | 1 | 5 | 3 | 17 | 20 | 7 | 18 | 0.58 | 0.20 | 0.28 |
6753338 | 6753352 | 14 | 4 | 0 | 4 | 4 | 11 | 15 | 8 | 11 | 0.61 | 0.21 | 0.42 |
6753338 | 6753359 | 21 | 3 | 0 | 3 | 7 | 4 | 11 | 10 | 4 | 0.33 | 0.21 | 0.29 |
6753338 | 6753361 | 23 | 3 | 0 | 3 | 1 | 9 | 10 | 4 | 9 | 0.82 | 0.23 | 0.31 |
6753340 | 6753342 | 2 | 5 | 14 | 19 | 1 | 20 | 21 | 6 | 34 | 0.30 | 0.47 | 0.15 |
6753340 | 6753346 | 6 | 5 | 10 | 15 | 1 | 17 | 18 | 6 | 27 | 0.36 | 0.45 | 0.18 |
6753340 | 6753349 | 9 | 4 | 9 | 13 | 3 | 12 | 15 | 7 | 21 | 0.12 | 0.46 | 0.25 |
6753340 | 6753352 | 12 | 5 | 6 | 11 | 4 | 8 | 12 | 9 | 14 | 0.12 | 0.48 | 0.39 |
6753340 | 6753359 | 19 | 5 | 4 | 9 | 6 | 3 | 9 | 11 | 7 | -0.11 | 0.50 | 0.39 |
6753340 | 6753361 | 21 | 5 | 4 | 9 | 0 | 8 | 8 | 5 | 12 | 0.61 | 0.47 | 0.29 |
6753340 | 6753364 | 24 | 3 | 4 | 7 | 3 | 4 | 7 | 6 | 8 | 0.00 | 0.50 | 0.43 |
6753340 | 6753366 | 26 | 3 | 3 | 6 | 1 | 6 | 7 | 4 | 9 | 0.39 | 0.46 | 0.31 |
6753342 | 6753346 | 4 | 5 | 0 | 5 | 1 | 28 | 29 | 6 | 28 | 0.90 | 0.15 | 0.18 |
6753342 | 6753349 | 7 | 4 | 0 | 4 | 3 | 22 | 25 | 7 | 22 | 0.71 | 0.14 | 0.24 |
6753342 | 6753352 | 10 | 4 | 0 | 4 | 5 | 15 | 20 | 9 | 15 | 0.58 | 0.17 | 0.38 |
6753342 | 6753359 | 17 | 3 | 0 | 3 | 9 | 7 | 16 | 12 | 7 | 0.33 | 0.16 | 0.37 |
6753342 | 6753361 | 19 | 3 | 0 | 3 | 2 | 13 | 15 | 5 | 13 | 0.72 | 0.17 | 0.28 |
6753342 | 6753364 | 22 | 2 | 0 | 2 | 4 | 9 | 13 | 6 | 9 | 0.48 | 0.13 | 0.40 |
6753346 | 6753349 | 3 | 4 | 0 | 4 | 3 | 24 | 27 | 7 | 24 | 0.71 | 0.13 | 0.23 |
6753346 | 6753352 | 6 | 4 | 0 | 4 | 6 | 17 | 23 | 10 | 17 | 0.54 | 0.15 | 0.37 |
6753346 | 6753359 | 13 | 3 | 0 | 3 | 11 | 8 | 19 | 14 | 8 | 0.30 | 0.14 | 0.36 |
6753346 | 6753361 | 15 | 3 | 0 | 3 | 2 | 16 | 18 | 5 | 16 | 0.73 | 0.14 | 0.24 |
6753346 | 6753364 | 18 | 2 | 0 | 2 | 5 | 11 | 16 | 7 | 11 | 0.44 | 0.11 | 0.39 |
6753349 | 6753352 | 3 | 9 | 0 | 9 | 4 | 18 | 22 | 13 | 18 | 0.75 | 0.29 | 0.42 |
6753349 | 6753359 | 10 | 7 | 1 | 8 | 8 | 10 | 18 | 15 | 11 | 0.40 | 0.31 | 0.42 |
6753349 | 6753361 | 12 | 4 | 4 | 8 | 2 | 15 | 17 | 6 | 19 | 0.42 | 0.32 | 0.24 |
6753349 | 6753364 | 15 | 7 | 0 | 7 | 1 | 14 | 15 | 8 | 14 | 0.90 | 0.32 | 0.36 |
6753349 | 6753366 | 17 | 2 | 4 | 6 | 6 | 9 | 15 | 8 | 13 | -0.06 | 0.29 | 0.38 |
6753352 | 6753359 | 7 | 8 | 4 | 12 | 8 | 8 | 16 | 16 | 12 | 0.17 | 0.43 | 0.43 |
6753352 | 6753361 | 9 | 4 | 8 | 12 | 2 | 13 | 15 | 6 | 21 | 0.24 | 0.44 | 0.22 |
6753352 | 6753364 | 12 | 7 | 4 | 11 | 2 | 11 | 13 | 9 | 15 | 0.50 | 0.46 | 0.38 |
6753352 | 6753366 | 14 | 3 | 7 | 10 | 5 | 8 | 13 | 8 | 15 | -0.09 | 0.43 | 0.35 |
6753359 | 6753361 | 2 | 7 | 10 | 17 | 3 | 14 | 17 | 10 | 24 | 0.26 | 0.50 | 0.29 |
6753359 | 6753364 | 5 | 10 | 4 | 14 | 1 | 16 | 17 | 11 | 20 | 0.68 | 0.45 | 0.35 |
6753359 | 6753366 | 7 | 5 | 8 | 13 | 8 | 9 | 17 | 13 | 17 | -0.09 | 0.43 | 0.43 |
6753359 | 6753383 | 24 | 4 | 2 | 6 | 0 | 10 | 10 | 4 | 12 | 0.74 | 0.38 | 0.25 |
6753359 | 6753385 | 26 | 3 | 1 | 4 | 0 | 10 | 10 | 3 | 11 | 0.83 | 0.29 | 0.21 |
6753361 | 6753364 | 3 | 5 | 3 | 8 | 6 | 19 | 25 | 11 | 22 | 0.35 | 0.24 | 0.33 |
6753361 | 6753366 | 5 | 7 | 0 | 7 | 7 | 18 | 25 | 14 | 18 | 0.60 | 0.22 | 0.44 |
6753361 | 6753383 | 22 | 3 | 2 | 5 | 1 | 12 | 13 | 4 | 14 | 0.56 | 0.28 | 0.22 |
6753361 | 6753385 | 24 | 3 | 2 | 5 | 0 | 11 | 11 | 3 | 13 | 0.71 | 0.31 | 0.19 |
6753364 | 6753366 | 2 | 6 | 6 | 12 | 10 | 17 | 27 | 16 | 23 | 0.12 | 0.31 | 0.41 |
6753364 | 6753383 | 19 | 4 | 3 | 7 | 1 | 17 | 18 | 5 | 20 | 0.58 | 0.28 | 0.20 |
6753364 | 6753385 | 21 | 3 | 3 | 6 | 0 | 17 | 17 | 3 | 20 | 0.65 | 0.26 | 0.13 |
6753366 | 6753383 | 17 | 3 | 11 | 14 | 2 | 11 | 13 | 5 | 22 | 0.08 | 0.48 | 0.19 |
6753366 | 6753385 | 19 | 3 | 11 | 14 | 0 | 12 | 12 | 3 | 23 | 0.33 | 0.46 | 0.12 |
6753383 | 6753385 | 2 | 4 | 4 | 8 | 1 | 35 | 36 | 5 | 39 | 0.57 | 0.18 | 0.11 |