Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:117903986 | ss | TG | 10.407 | 52 | TT | 6.667 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:28019342 | ss | AG | 3.672 | 19 | GG | 2.037 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61523643 | ss | AG | 7.485 | 46 | AA | 0.255 | AT | 0.685 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:134895025 | ds | CC | Un | 18 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2732179 | ss | AA | 30.624 | 81 | AT | 2.155 | AG | 1.297 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:74071367 | ds | TC | 20.556 | 607 | CC | 7.169 | TT | 216.856 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812184 | ds | AG | 12.966 | 84 | GG | 5.338 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225961 | ds | TC | 15.654 | 670 | CC | 8.719 | TT | 230.702 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112015688 | ds | TT | 16.255 | 62 | TG | 18.037 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52180732 | ss | AG | 44.27 | 252 | GG | 9.329 | TG | 0.009 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61848793 | ss | AG | 7.22 | 29 | GG | 2.346 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131482881 | ds | AA | 48.791 | 161 | AG | 39.894 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6472694 | ds | AG | 6.584 | 35 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450575 | ss | AG | 90.837 | 548 | AT | 0.483 | TG | 17.432 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48560145 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62064691 | ds | AG | 1.616 | 11 | GG | 0.455 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:13046057 | ss | TG | 5.671 | 18 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129388424 | ss | AA | 31.258 | 80 | AT | 0 | AG | 1.848 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693682 | ss | AG | 28.374 | 96 | TG | 0.193 | GG | 0.057 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44094106 | ss | AT | 14.309 | 54 | AA | 0.781 | AG | 0.215 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41978387 | ds | AG | 23.304 | 154 | AA | 10.954 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68150437 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56452670 | ds | TG | 10.35 | 30 | TT | 1.873 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:689847 | ss | AG | 31.418 | 106 | GG | 0.235 | TG | 0.167 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493315 | ds | AC | 9.607 | 120 | CC | 24.368 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131995488 | ss | TG | 32.19 | 132 | GG | 3.801 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493873 | ss | AG | 9.116 | 70 | GG | 3.918 | TG | 0.54 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59398567 | ss | AG | 16.067 | 74 | GG | 8.586 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124100172 | ds | TC | 2.747 | 267 | CC | 0.461 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26158593 | ss | AG | 2.855 | 21 | TG | 0 | AT | 2.472 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:149525236 | ss | TG | 5.029 | 18 | GG | 0.925 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:1793147 | ss | GG | Un | 88 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52356070 | ds | AG | 10.671 | 75 | AA | 5.221 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36497049 | ss | TG | 29.494 | 91 | GG | 3.32 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43022247 | ss | TG | 7.092 | 79 | TT | 16.008 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100616399 | ds | TC | 4.097 | 14 | CC | 1.434 | TT | 1.004 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18436754 | ss | GG | 39.736 | 103 | TG | 24.826 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600322 | ds | GG | Un | 15 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67944736 | ds | TT | 45.552 | 399 | TC | 180.755 | AT | 3.486 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60474728 | ss | AG | 5.352 | 27 | AT | 0.385 | TG | 0.764 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833740 | ss | AA | 72.589 | 200 | AT | 2.893 | AG | 1.239 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191180357 | ss | TG | 22.306 | 76 | AT | 0 | AG | 3.025 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131466825 | ds | AA | 18.01 | 70 | AG | 18.508 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33148692 | ss | TG | 3.525 | 13 | TT | 0.46 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49184995 | ds | AG | 4.763 | 38 | GG | 4.473 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:38238293 | ss | AG | 1.726 | 11 | GG | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51686707 | ds | TG | 17.495 | 56 | CG | 4.343 | GG | 4.237 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46686557 | ss | GG | 37.039 | 106 | TG | 3.34 | AG | 0.887 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75682550 | ss | GG | Un | 43 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:25430583 | ss | GG | 33.116 | 91 | TG | 22.721 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61674394 | ss | AG | 17.13 | 59 | TG | 0.147 | AT | 1.451 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51877914 | ds | AT | 4.409 | 99 | TT | 23.744 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47698976 | ss | AG | 12.753 | 51 | AA | 1.25 | AT | 0.236 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:31718894 | ds | TC | 1.354 | 39 | TT | 9.342 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108755734 | ss | AG | 28.05 | 145 | GG | 4.939 | TG | 0.235 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040279 | ds | TC | 20.66 | 50 | TT | 41.82 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1525927 | ds | GG | 62.863 | 154 | TG | 1.183 | CG | 36.108 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280104 | ss | GG | 43.582 | 140 | AG | 3.944 | TG | 1.954 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:73447814 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22753135 | ds | GG | Un | 123 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131818729 | ds | CG | 34.941 | 117 | TG | 8.777 | CC | 8.84 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494908 | ss | GG | Un | 95 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26166822 | ds | AG | 6.869 | 48 | GG | 0.915 | CG | 0.672 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49054556 | ds | CC | Un | 118 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45957431 | ss | TG | 2.508 | 12 | TT | 0.93 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:125776761 | ss | TG | 2.784 | 11 | GG | 0.462 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51281287 | ds | TC | 2.329 | 143 | TT | 1.087 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600319 | ds | CC | Un | 16 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49817621 | ss | TG | 2.836 | 18 | GG | 2.824 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116077774 | ss | AG | 44.503 | 286 | AA | 12.67 | AT | 0.324 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:73985647 | ds | TC | 1.027 | 121 | TT | 2.341 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6613779 | ss | AA | 11.258 | 22 | AT | 5.031 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59833766 | ss | AG | 5.763 | 19 | AA | 0.463 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51734587 | ss | AG | 15.986 | 57 | AT | 0.07 | TG | 2.26 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:588463 | ss | AG | 3.525 | 13 | GG | 0.46 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191180311 | ss | GG | 13.1 | 35 | AG | 8.651 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52680764 | ss | AG | 9.116 | 44 | AA | 1.544 | AT | 0.019 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19686164 | ds | TC | 5.365 | 66 | CC | 0.468 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19686581 | ds | CC | 17.079 | 12 | TC | 18.902 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8993842 | ss | GG | 39.668 | 142 | TG | 7.814 | AG | 1 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52960502 | ds | AG | 50.278 | 831 | AA | 167.27 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61854240 | ss | TG | 40.809 | 195 | GG | 1.957 | AG | 0.198 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2769144 | ds | TC | 3.206 | 16 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4011137 | ss | GG | 80.189 | 260 | TG | 65.901 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6472729 | ds | AG | 2.551 | 28 | GG | 3.776 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120840818 | ss | AG | 18.056 | 78 | AA | 0.617 | AT | 0.391 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039779 | ss | TG | 12.075 | 64 | TT | 8.899 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59429798 | ss | GG | 15.997 | 132 | AG | 35.566 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34125431 | ds | GG | 108.543 | 317 | AG | 75.377 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131519917 | ds | GG | 241.837 | 171 | TG | 1.489 | CG | 44.318 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355119 | ss | AT | 3.647 | 53 | TT | 11.141 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131760191 | ds | TC | 108.529 | 71 | CC | 20.628 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:117025571 | ds | CG | 1.084 | 58 | GG | 15.681 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:130144304 | ss | GG | 8.989 | 22 | TG | 0 | AG | 0.65 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122016971 | ss | TG | 10.954 | 63 | GG | 9.089 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30799363 | ds | AG | 1.49 | 30 | GG | 6.375 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138090 | ss | AG | 2.561 | 53 | AA | 11.885 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33653491 | ss | AG | 16.609 | 71 | AT | 0.443 | TG | 2.373 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136508 | ds | TT | 305.162 | 15 | TC | Un | TG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51726941 | ds | TC | 2.793 | 476 | TT | 1.865 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59552992 | ds | TC | 2.41 | 30 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113614584 | ss | GG | Un | 55 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:114145576 | ss | AG | 3.12 | 30 | GG | 5.744 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123589664 | ss | TG | 2.508 | 12 | GG | 0.93 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27754960 | ds | TC | 1.968 | 16 | CC | 1.22 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:55302822 | ss | TG | 6.51 | 21 | GG | 0.464 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:31296639 | ds | AG | 1.25 | 44 | GG | 10.063 | AA | 82.643 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4541873 | ds | AG | 2.712 | 20 | GG | 1.561 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122635620 | ss | GG | 26.252 | 156 | AG | 11.137 | TG | 1.657 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2670910 | ss | AA | 13.462 | 28 | AT | 0 | AG | 0.464 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:30815284 | ds | AT | 7.693 | 49 | TT | 18.572 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113336391 | ss | TG | 6.008 | 63 | GG | 5.543 | AG | 0.407 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:70119948 | ss | AT | 2.551 | 29 | TT | 5.563 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120723457 | ss | AT | 11.498 | 97 | AA | 17.9 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:23385240 | ds | AG | 2.712 | 20 | AA | 1.561 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424809 | ds | CC | Un | 105 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34924447 | ss | AG | 7.542 | 36 | AA | 0.971 | AT | 0.146 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31244811 | ss | AG | 2.166 | 14 | GG | 2.182 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173962 | ds | CC | Un | 15 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173932 | ds | TT | Un | 17 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:10146954 | ss | TG | 10.43 | 44 | TT | 0.876 | AT | 0.248 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52714278 | ss | TG | 2.836 | 18 | TT | 2.824 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:83941393 | ss | AG | 2.353 | 32 | GG | 6.754 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040284 | ds | AG | 1.544 | 41 | GG | 9.133 | AA | 77.767 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:16658890 | ss | AT | 4.912 | 23 | TT | 2.339 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:92385384 | ss | AG | 4.828 | 41 | AA | 7.483 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61662002 | ss | AG | 16.48 | 54 | TG | 0.07 | AT | 1.206 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61522698 | ss | GG | 19.21 | 54 | TG | 13.544 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55757491 | ss | AG | 88.217 | 452 | AT | 0.107 | TG | 1.199 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:143331850 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119451304 | ss | AG | 6.202 | 922 | GG | 114.156 | TG | 3.18 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1335676 | ss | AG | 1.781 | 15 | GG | 2.376 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1845064 | ds | GG | 168.597 | 515 | AG | 133.382 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4789171 | ds | AG | 4.701 | 31 | AA | 1.913 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103204972 | ss | TG | 75.597 | 522 | TT | 22.36 | AT | 0.311 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:10012568 | ss | AT | 4.277 | 17 | AA | 1.089 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55660938 | ss | GG | Un | 44 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:62501896 | ds | AG | 11.012 | 85 | AA | 8.215 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59476732 | ss | AG | 44.725 | 389 | GG | 28.582 | TG | 0.458 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130980722 | ss | AA | 51.633 | 224 | AT | 15.923 | AG | 0.673 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33651111 | ss | AG | 2.784 | 11 | AA | 0.462 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2279405 | ss | TG | 28.709 | 102 | AT | 0.227 | AG | 1.924 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61657631 | ds | TC | 37.095 | 283 | TT | 9.578 | CC | 81.173 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67366995 | ss | TG | 12.729 | 84 | TT | 5.97 | AT | 0.175 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:105504384 | ds | AG | 4.398 | 72 | GG | 13.769 | AA | 127.961 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100560436 | ds | TC | 2.1 | 179 | CC | 14.415 | TT | 51.618 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:134895012 | ds | TT | Un | 36 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56214069 | ss | AA | 10.454 | 71 | AG | 4.391 | AT | 1.527 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:24921363 | ss | AG | 21.327 | 130 | AA | 8.049 | AT | 0.335 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50913835 | ss | AT | 19.22 | 82 | TT | 8.58 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100794964 | ss | AG | 20.066 | 176 | GG | 11.199 | TG | 1.032 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33320048 | ss | TG | 31.813 | 130 | TT | 3.801 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61389926 | ss | AG | 9.416 | 41 | GG | 1.042 | TG | 0.278 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2659140 | ss | AG | 41.913 | 255 | GG | 8.67 | TG | 0.428 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59260509 | ss | AG | 8.363 | 28 | GG | 0.935 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:60006709 | ss | TG | 27.035 | 130 | GG | 11.45 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:81447060 | ss | AT | 1.255 | 12 | AA | 1.627 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36788219 | ss | AT | 12.86 | 42 | TG | 0 | AG | 0.885 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:174666171 | ss | TG | 6.751 | 26 | TT | 1.871 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:29828459 | ss | TG | 6.982 | 39 | TT | 5.223 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9491798 | ds | GG | 68.18 | 214 | AG | 17.289 | TG | 6.788 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833739 | ss | GG | 75.132 | 199 | TG | 1.833 | AG | 1.82 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61529949 | ss | AG | 21.923 | 71 | AA | 3.316 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:31718492 | ss | TG | 3.79 | 57 | GG | 12.126 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:101876779 | ss | TG | 7.322 | 47 | TT | 7.163 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635357 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131501018 | ss | AG | 3.57 | 14 | GG | 1.224 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123376921 | ss | AG | 35.919 | 187 | AA | 0.967 | AT | 0.489 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012525 | ss | AT | 6.527 | 74 | AA | 6.689 | AG | 0.382 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102884112 | ss | TG | 10.785 | 44 | GG | 3.781 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2870783 | ds | AG | 5.849 | 82 | GG | 14.472 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:95318247 | ss | AT | 10.326 | 65 | AA | 10.369 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75797341 | ds | TC | 1.749 | 15 | TT | 4.866 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635410 | ss | TG | 2.082 | 20 | GG | 3.819 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:16658930 | ds | AG | 5.908 | 34 | GG | 1.432 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144645 | ss | AA | 32.753 | 71 | AT | 16.36 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012491 | ss | AT | 9.017 | 69 | TT | 12.038 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450018 | ds | CC | 2.192 | 37 | TC | 4.569 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:28128749 | ds | TT | 8.914 | 464 | TC | 7.123 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:156510422 | ss | GG | 4.015 | 18 | AG | 0.864 | TG | 0.436 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61873385 | ss | AG | 16.267 | 106 | GG | 6.403 | TG | 0.358 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55916404 | ss | AA | 52.973 | 186 | AT | 48.301 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123422613 | ss | AT | 9.736 | 55 | AA | 8.126 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38931524 | ss | AT | 2.574 | 17 | TT | 2.35 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25124101 | ss | AT | 94.588 | 494 | TG | 0.097 | AG | 7.233 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67012570 | ss | AG | 19.353 | 62 | AT | 0.067 | TG | 0.799 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44076240 | ss | TG | 2.836 | 18 | TT | 2.824 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41728793 | ss | AA | 9.23 | 78 | AT | 20.559 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138192 | ss | TG | 1.979 | 40 | TT | 8.74 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491707 | ss | AA | Un | 18 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:142121445 | ss | AG | 2.533 | 11 | TG | 0 | AT | 0.443 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131859966 | ds | GG | Un | 44 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131358770 | ss | TG | 15.689 | 53 | TT | 3.009 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860835 | ss | AG | 20.108 | 72 | AT | 0.185 | TG | 0.276 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59951474 | ss | AG | 2.081 | 29 | AA | 2.259 | AT | 0.262 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44215549 | ss | AG | 5.859 | 38 | GG | 5.711 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:77135234 | ss | AT | 2.508 | 12 | TT | 0.93 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132739809 | ss | GG | 9.904 | 20 | AG | 4.564 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131369969 | ss | TG | 4.772 | 15 | TT | 0.158 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:80676771 | ss | AT | 3.754 | 44 | TT | 8.672 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061824 | ds | TG | 18.406 | 112 | AT | 43.684 | CG | 15.207 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:63131982 | ss | AG | 32.529 | 296 | GG | 21.956 | TG | 0.665 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50925569 | ds | CC | 64.951 | 197 | CG | 8.509 | AC | 45.369 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:39373084 | ss | AT | 12.166 | 61 | AA | 8.115 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61844663 | ds | CC | Un | 193 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43997521 | ds | TT | Un | 72 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362250 | ss | GG | 217.016 | 648 | TG | 13.172 | AG | 1.346 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:24987046 | ss | TG | 6.51 | 21 | TT | 0.464 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225962 | ds | AG | 64.45 | 685 | GG | 109.586 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67488064 | ss | TG | 4.895 | 32 | GG | 4.743 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124584158 | ds | AG | 64.538 | 444 | GG | 36.427 | AA | 0.165 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61189376 | ds | TC | 11.996 | 53 | CC | 1.432 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:31790426 | ss | TG | 1.726 | 11 | TT | 1.42 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215622 | ss | AA | 15.378 | 28 | AT | 6.43 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123395187 | ss | AG | 1.313 | 17 | TG | 0.005 | GG | 0.706 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909985 | ss | TG | 71.34 | 445 | TT | 13.83 | AT | 0.428 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:24847059 | ss | AT | 20.654 | 58 | TT | 0 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860714 | ds | AC | 8.975 | 61 | AA | 0.391 | CG | 2.624 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61225424 | ds | AG | 5.122 | 80 | GG | 14.484 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834212 | ss | GG | Un | 129 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55416479 | ss | AG | 45.683 | 278 | GG | 12.283 | TG | 0.101 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468145 | ss | AG | 25.253 | 117 | GG | 6.222 | TG | 0.147 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:8997198 | ss | AA | 9.247 | 19 | AT | 4.323 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60386832 | ss | AG | 1.241 | 29 | GG | 6.636 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44073099 | ds | TG | 2.68 | 37 | GG | 6.695 | CG | 9.489 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2769067 | ds | GG | Un | 15 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136577 | ss | GG | 58.112 | 144 | TG | 0 | AG | 1.099 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:97375097 | ss | AG | 2.166 | 14 | AA | 2.182 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56527295 | ss | TG | 4.077 | 30 | TT | 4.749 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:37825521 | ds | TT | 3.895 | 248 | TC | 4.996 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:91062203 | ss | AG | 1.726 | 11 | AA | 1.42 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:41006157 | ds | AG | 1.551 | 13 | AA | 1.516 | GG | 121.175 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61131226 | ss | GG | Un | 59 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6037457 | ds | AG | 2.622 | 32 | GG | 4.742 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1254531 | ss | GG | 12.51 | 115 | TG | 30.557 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68265382 | ss | TG | 14.311 | 46 | GG | 1.885 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450534 | ss | TG | 117.315 | 580 | TT | 1.907 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34926031 | ds | TG | 5.281 | 36 | AT | 6.102 | TT | 0.374 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:16503547 | ss | GG | 134.418 | 490 | TG | 16.804 | AG | 3.446 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:126197024 | ds | TG | 54.181 | 542 | GG | 33.248 | AT | 1.213 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56864560 | ss | AG | 214.243 | 1586 | GG | 60.993 | TG | 0.998 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:9344079 | ss | GG | Un | 20 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8265254 | ss | GG | 12.137 | 44 | TG | 11.212 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1858043 | ss | AT | 6.256 | 23 | TT | 1.398 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60962672 | ss | AG | 1.011 | 17 | GG | 3.413 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60152743 | ss | AG | 2.574 | 17 | GG | 2.35 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50501369 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066740 | ss | GG | Un | 34 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:71182645 | ss | GG | 20.283 | 35 | TG | 8.051 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59988031 | ds | TG | 27.107 | 74 | GG | 5.386 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:155405373 | ss | GG | Un | 22 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93057893 | ds | AG | 3.183 | 42 | GG | 6.683 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280195 | ss | AT | 3.718 | 31 | AA | 5.239 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102759153 | ss | TG | 2.022 | 27 | TT | 5.287 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833781 | ss | AA | 45.244 | 179 | AT | 47.43 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:17132036 | ss | AA | Un | 26 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59385494 | ss | TG | 80.8 | 446 | GG | 9.309 | AG | 0.057 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136613 | ss | AA | 75.484 | 226 | AT | 3.898 | AG | 1.889 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30214609 | ss | TG | 2.412 | 26 | TT | 4.78 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355247 | ds | TC | 5.701 | 24 | TT | 13.596 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:57201122 | ss | AT | 49.574 | 223 | AA | 3.331 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164585 | ss | GG | 54.239 | 188 | TG | 5.285 | AG | 2.513 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61760058 | ss | TG | 15.649 | 50 | TT | 1.887 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21481888 | ss | AG | 3.57 | 14 | AA | 1.224 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294311 | ds | AG | 37.784 | 337 | GG | 43.112 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21546098 | ds | TT | Un | 1012 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52633136 | ss | AG | 2.544 | 15 | AA | 0.077 | AT | 0.342 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124584204 | ds | TC | 8.993 | 791 | CC | 33.257 | TT | 255.063 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377108 | ds | CC | Un | 222 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45759609 | ds | TC | 24.737 | 162 | TT | 3.852 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468933 | ss | TG | 45.848 | 265 | GG | 8.52 | AG | 0.276 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1975025 | ss | AG | 31.377 | 124 | TG | 0.506 | AT | 0.998 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728423 | ss | GG | 17.476 | 31 | AG | 7.123 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:97421942 | ss | AG | 1.996 | 24 | AT | 0.637 | AA | 0.007 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1830526 | ds | AG | 110.285 | 722 | GG | 48.73 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:97813319 | ss | TG | 38.573 | 182 | TT | 1.332 | AT | 0.073 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52641528 | ss | AG | 10.421 | 67 | GG | 3.271 | TG | 0.519 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:24986231 | ds | TG | 1.597 | 15 | GG | 8.193 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56155849 | ds | TC | 2.714 | 48 | TT | 0.925 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59928680 | ss | AG | 3.115 | 15 | AT | 0.148 | TG | 0.511 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4689710 | ss | GG | 52.752 | 182 | TG | 9.196 | AG | 0.546 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:53913253 | ds | AC | 1.803 | 15 | CG | 7.319 | AA | 0.621 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59032679 | ss | AG | 3.89 | 34 | GG | 5.723 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33201610 | ss | TG | 4.552 | 26 | GG | 3.477 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61661919 | ss | GG | 41.804 | 95 | TG | 21.871 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2939700 | ss | GG | 27.791 | 64 | TG | 15.652 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9492371 | ss | TG | 7.263 | 24 | TT | 0.931 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61877620 | ss | AG | 4.34 | 28 | GG | 1.093 | TG | 0.179 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:63802105 | ss | TG | 11.335 | 42 | GG | 2.829 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33618737 | ds | TC | 4.701 | 169 | TT | 1.913 | CC | 56.982 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17543329 | ss | AA | 71.058 | 253 | AT | 10.248 | AG | 2.154 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635678 | ds | AC | 18.604 | 90 | CC | 0.257 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21481824 | ss | AT | 6.453 | 27 | AA | 2.343 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61451998 | ss | TG | 28.403 | 155 | TT | 16.749 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834358 | ss | AG | 14.137 | 89 | GG | 13.944 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4541872 | ds | CG | 2.994 | 21 | AC | 28.405 | CC | 23.027 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46439659 | ss | AA | 49.219 | 188 | AT | 2.786 | AG | 4.511 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:149527021 | ss | TG | 5.763 | 19 | TT | 0.463 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93568292 | ss | TG | 33.847 | 209 | GG | 24.46 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129189388 | ss | AA | 12.357 | 28 | AG | 6.456 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59396580 | ss | AA | Un | 18 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115430690 | ss | GG | 33.014 | 78 | TG | 18.647 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52375564 | ss | AT | 20.203 | 64 | TG | 0 | AG | 1.648 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61666626 | ss | TG | 11.293 | 38 | GG | 1.881 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61692054 | ds | CC | 44.831 | 47 | TC | 29.889 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60785185 | ss | TG | 36.799 | 155 | TT | 3.328 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25009813 | ds | AG | 5.748 | 50 | AA | 6.42 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131392282 | ss | AG | 3.473 | 23 | GG | 3.3 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61562839 | ds | AC | 5.062 | 157 | AT | 20.869 | CG | 4.937 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44575698 | ss | TG | 1.148 | 25 | TT | 5.36 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59955427 | ds | AA | 8.032 | 34 | AG | 8.189 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130054811 | ds | TC | 34.84 | 245 | TT | 7.686 | CC | 78.241 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129692007 | ss | AT | 1.726 | 11 | AA | 1.42 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:117072883 | ss | AG | 1.726 | 11 | GG | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50875542 | ss | AA | 52.482 | 139 | AT | 33.307 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:17132031 | ss | GG | Un | 23 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44215597 | ss | AG | 2.836 | 18 | GG | 2.824 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120715956 | ss | AG | 11.391 | 71 | AA | 2.264 | AT | 0.842 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:44782895 | ss | AT | 6.256 | 23 | AA | 1.398 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61463650 | ss | AG | 4.679 | 49 | GG | 4.029 | TG | 0.408 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812678 | ss | AT | 115.284 | 751 | TT | 23.79 | TG | 0.336 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50694689 | ss | AG | 5.086 | 73 | AA | 6.016 | AT | 0.675 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61590319 | ss | AG | 56.285 | 313 | AA | 7.287 | AT | 0.223 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:18805850 | ss | TG | 4.175 | 14 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61061345 | ds | AG | 15.431 | 121 | AA | 12.613 | GG | 3.085 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452568 | ds | AG | 65.422 | 623 | GG | 87.403 | AA | 13.279 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59262252 | ss | AT | 4.286 | 16 | TT | 0.923 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115961279 | ss | TG | 11.293 | 38 | GG | 1.881 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132747049 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47495105 | ss | TG | 51.657 | 445 | GG | 67.127 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2136163 | ss | AA | 12.623 | 24 | AT | 5.498 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:12578115 | ss | AT | 2.574 | 17 | AA | 2.35 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59369001 | ds | TC | 7.499 | 306 | CC | 24.655 | TT | 77.748 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48584201 | ss | AA | Un | 44 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123477423 | ss | GG | 2.216 | 12 | AG | 2.776 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:52538401 | ss | AG | 2.836 | 18 | GG | 2.824 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:13045390 | ss | TG | 3.473 | 23 | TT | 3.3 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22752130 | ss | AG | 42.654 | 315 | AA | 14.173 | AT | 0.83 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294194 | ds | CC | 265.913 | 567 | TC | Un | TG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93921683 | ds | TC | 2.341 | 107 | CC | 0.922 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:43277865 | ss | AG | 2.508 | 12 | AA | 0.93 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362251 | ss | GG | 210.183 | 665 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61573179 | ss | TG | 1.223 | 65 | GG | 16.274 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54401300 | ss | AA | Un | 1217 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:108290261 | ss | TG | 10.895 | 41 | TT | 3.003 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:34735210 | ss | AT | 11.75 | 35 | TT | 0.469 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52224383 | ss | TG | 5.99 | 24 | TT | 1.868 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46565494 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93020303 | ds | AT | 4.858 | 43 | AA | 1.406 | TG | 1.008 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61317513 | ss | TG | 17.017 | 88 | GG | 4.939 | AG | 0.023 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:110521180 | ss | AG | 3.876 | 24 | TG | 0.31 | AT | 0.328 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30840115 | ss | TG | 5.016 | 17 | GG | 0.461 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138102 | ss | GG | 34.815 | 96 | TG | 23.931 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56156422 | ss | AT | 38.6 | 164 | TG | 0 | AG | 2.047 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115961487 | ds | TC | 8.49 | 13 | CC | 8.584 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43997437 | ds | CG | 18.896 | 89 | GG | 0.336 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2399503 | ss | AG | 4.138 | 21 | AA | 2.339 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129189268 | ds | TC | 180.794 | 37 | CC | 60.13 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:538542 | ss | GG | 34.507 | 75 | TG | 17.28 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:31200574 | ss | AG | 37.433 | 267 | AA | 12.526 | AT | 0.809 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59928619 | ss | AA | 3.345 | 14 | AT | 0 | AG | 0.501 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102884061 | ss | AT | 11.72 | 51 | AA | 5.219 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:63439540 | ss | GG | 12.103 | 118 | AG | 13.516 | TG | 0.366 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59384335 | ss | AG | 45.018 | 229 | AT | 0.273 | TG | 5.176 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3162819 | ds | TG | 39.003 | 252 | TT | 27.837 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:67932293 | ss | TG | 3.525 | 13 | GG | 0.46 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:40060679 | ss | AG | 1.627 | 66 | GG | 15.699 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:10012670 | ss | TG | 1.781 | 15 | TT | 2.376 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130859491 | ss | TG | 8.749 | 33 | TT | 2.349 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:99491791 | ds | AC | 7.86 | 34 | AA | 19.887 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103183667 | ss | AG | 3.214 | 47 | AA | 9.877 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33837195 | ss | GG | 35.892 | 78 | TG | 17.675 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:6141716 | ss | GG | 29.069 | 60 | TG | 13.831 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34523013 | ss | AA | 4.599 | 11 | AG | 2.17 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611633 | ds | TT | Un | 20 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1830842 | ds | TC | 33.215 | 86 | CC | 11.229 | TT | 11.36 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62200609 | ss | TG | 3.928 | 51 | GG | 4.581 | AG | 0.428 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:47763437 | ss | TG | 3.57 | 14 | TT | 1.224 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131475953 | ds | AA | Un | 232 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54400972 | ds | GG | 31.249 | 93 | AG | 21.412 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33198566 | ss | TG | 19.789 | 84 | TT | 8.58 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21545911 | ds | AA | 222.206 | 301 | AC | 7.429 | AT | 76.962 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4751592 | ss | TG | 7.981 | 29 | AT | 0.1 | AG | 0.78 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12401341 | ss | TG | 3.562 | 62 | TT | 13.618 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130172801 | ds | AG | 3.689 | 25 | AA | 1.4 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33485801 | ds | AC | 13.081 | 27 | CC | 1.41 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:31102712 | ss | AG | 5.716 | 39 | GG | 2.458 | TG | 0.37 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:13149238 | ss | AG | 5.892 | 21 | TG | 0 | AT | 0.642 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61567914 | ss | AG | 3.14 | 100 | AA | 10.373 | AT | 0.522 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:44947546 | ds | GG | Un | 129 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:7200170 | ss | AG | 2.666 | 21 | GG | 3.312 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3022040 | ds | AA | 9.244 | 46 | AG | 12.047 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46565536 | ss | AG | 6.465 | 26 | TG | 0.107 | AT | 0.423 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:10601469 | ds | TC | 1.115 | 137 | CC | 7.241 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52646696 | ss | GG | 40.341 | 91 | TG | 20.953 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040097 | ss | AG | 2.352 | 23 | AT | 0.148 | TG | 2.865 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130736253 | ds | AA | 2.832 | 13 | AG | 2.914 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294339 | ds | TC | 88.208 | 138 | CC | 86.166 | AC | 2.581 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491733 | ss | GG | 13.321 | 25 | TG | 5.725 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46878294 | ss | AG | 3.338 | 32 | GG | 0.172 | TG | 0.654 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131432382 | ss | AG | 46.241 | 211 | AT | 0.034 | TG | 3.083 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1776247 | ss | AG | 8.967 | 34 | TG | 0.094 | GG | 0.017 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23917285 | ds | GG | 17.036 | 64 | AG | 17.483 | AA | 9.406 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61743102 | ss | GG | 11.258 | 22 | AG | 5.031 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5879473 | ds | AG | 1.683 | 20 | GG | 2.814 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54980528 | ds | AA | Un | 63 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108636599 | ss | AG | 16.631 | 111 | GG | 5.941 | TG | 0.708 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93020159 | ds | AG | 7.79 | 53 | AA | 4.06 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5934749 | ss | GG | Un | 20 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:73985654 | ds | TC | 4.217 | 133 | TT | 0.49 | CC | 43.624 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130890925 | ss | AG | 1.948 | 26 | GG | 1.747 | TG | 0.226 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:208951368 | ss | AA | 2.21 | 11 | AG | 2.26 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59927649 | ds | TC | 2.573 | 191 | TT | 10.817 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61667251 | ds | CC | Un | 73 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42231632 | ss | GG | 5.934 | 14 | TG | 3.16 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834233 | ss | AA | 74.764 | 198 | AT | 1.828 | AG | 1.356 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:928949 | ds | AC | 1.35 | 15 | CG | 13.274 | CC | 5.8 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136366 | ds | TT | 241.499 | 119 | TC | 31.159 | AT | 17.709 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33560729 | ss | AG | 2.291 | 25 | GG | 1.589 | TG | 0.417 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123467805 | ss | AG | 8.096 | 40 | GG | 4.739 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:152829448 | ss | AG | 2.166 | 11 | AA | 0.019 | AT | 0.181 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123495917 | ss | AG | 77.069 | 390 | TG | 0.053 | AT | 5.527 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55367784 | ds | AG | 23.308 | 148 | GG | 7.824 | AA | 9.995 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066829 | ds | AT | 11.102 | 19 | AC | 1.774 | TC | 0.904 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120840753 | ss | TG | 6.481 | 75 | TT | 7.101 | AT | 0.417 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173939 | ds | GG | Un | 12 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59320752 | ss | AG | 19.555 | 133 | AA | 10.767 | AT | 0.207 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600354 | ds | CC | 24.683 | 12 | TC | 17.28 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59541754 | ds | AG | 4.017 | 94 | GG | 20.099 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:31102645 | ds | AG | 12.129 | 107 | AA | 13.072 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49542387 | ds | AG | 5.401 | 46 | AA | 4.738 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:32150634 | ds | GG | Un | 24 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30245409 | ss | TG | 2.082 | 20 | GG | 3.819 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61449772 | ss | AG | 5.004 | 74 | GG | 15.544 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47976604 | ss | AG | 19.154 | 54 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61848808 | ss | AG | 1.476 | 19 | GG | 3.666 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46013536 | ss | GG | 13.1 | 30 | TG | 7.518 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112280949 | ss | AT | 17.123 | 71 | AG | 0.212 | TG | 4.063 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144368 | ss | AG | 12.538 | 50 | AT | 0.213 | TG | 0.466 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42232471 | ss | AG | 41.701 | 240 | TG | 0.088 | AT | 14.347 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30214127 | ds | AT | 1.45 | 54 | AA | 4.682 | TG | 2.489 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450073 | ss | AG | 5.671 | 18 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728464 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:121886532 | ss | AT | 1.781 | 15 | AA | 2.376 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:217512001 | ss | TG | 11.504 | 33 | TT | 0.167 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:3978073 | ss | AG | 31.889 | 258 | AA | 15.891 | AT | 1.401 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:39000101 | ss | AT | 37.077 | 165 | AG | 0.016 | AA | 0.238 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1900284 | ss | AG | 34.687 | 215 | AA | 9.96 | AT | 0.257 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57467469 | ss | AG | 28.349 | 123 | AT | 0.277 | TG | 1.365 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173872 | ss | AG | 4.286 | 16 | GG | 0.923 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119901005 | ss | TG | 4.175 | 14 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119661655 | ds | CG | 9.956 | 31 | GG | 1.873 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154453146 | ss | GG | 6.603 | 15 | TG | 3.384 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123966760 | ss | AA | 74.449 | 247 | AT | 9.927 | AG | 1.379 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131916013 | ss | GG | 9.125 | 18 | AG | 3.816 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131577416 | ss | GG | 41.202 | 127 | TG | 32.29 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:84872723 | ds | CC | Un | 17 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:68355355 | ss | AT | 8.511 | 66 | TT | 11.553 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62185227 | ss | TG | 6.453 | 27 | TT | 2.343 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59368915 | ss | TG | 13.55 | 61 | TT | 7.144 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:970379 | ss | AT | 3.98 | 17 | TG | 0.11 | TT | 0.177 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61397685 | ss | AG | 3.825 | 22 | GG | 2.817 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:40323480 | ss | AG | 4.642 | 67 | AA | 14.075 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6732520 | ss | TG | 10.014 | 38 | GG | 2.827 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22752752 | ss | AT | 19.456 | 71 | TT | 5.22 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19141682 | ds | TC | 34.193 | 33 | CC | 1.441 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59973182 | ss | AT | 2.353 | 32 | AA | 6.754 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:87477444 | ss | TG | 28.471 | 101 | TT | 7.136 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22750861 | ds | TC | 1.616 | 95 | CC | 0.455 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138151 | ss | GG | 26.986 | 60 | TG | 14.419 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131995477 | ds | AG | 16.962 | 91 | GG | 0.967 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59396572 | ss | TG | 6.51 | 21 | GG | 0.464 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494909 | ss | GG | 37.35 | 97 | TG | 23.689 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93058017 | ds | CG | 10.465 | 25 | TG | 1.56 | TC | 3.33 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56159513 | ss | AA | 27.691 | 74 | AT | 18.302 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1974912 | ds | AT | 5.993 | 40 | TG | 3.777 | TT | 2.209 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51583861 | ss | TG | 7.009 | 25 | TT | 1.4 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132729694 | ss | GG | 6.603 | 15 | TG | 3.384 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102848278 | ds | AG | 6.888 | 149 | AA | 32.37 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124136013 | ds | GG | 193.292 | 653 | AG | 44.205 | TG | 22.208 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67488431 | ss | AG | 25.038 | 73 | AA | 1.42 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21450778 | ds | TG | 31.783 | 34 | GG | 112.507 | CG | 10.175 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55767244 | ss | TG | 4.752 | 28 | GG | 3.777 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100325636 | ss | TG | 171.676 | 951 | GG | 8.739 | AG | 0.117 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1619095 | ss | GG | Un | 20 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52714799 | ds | TC | 5.044 | 27 | TT | 8.126 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61810559 | ss | GG | Un | 45 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:99417532 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52625319 | ss | AT | 25.646 | 80 | AA | 3.144 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215261 | ss | AA | 14.253 | 56 | AG | 14.529 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11545042 | ss | GG | 155.309 | 469 | TG | 10.823 | AG | 1.71 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44240050 | ss | AG | 12.482 | 72 | GG | 10.541 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61665157 | ss | TG | 4.772 | 15 | TT | 0.158 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38999855 | ss | AT | 8.667 | 26 | TT | 0 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131814219 | ss | AG | 1.711 | 61 | GG | 6.826 | TG | 0.486 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31245691 | ds | AG | 12.999 | 80 | GG | 3.144 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:16758002 | ss | AG | 12.206 | 41 | AA | 2.054 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59945132 | ss | AG | 3.005 | 23 | AA | 1.044 | AT | 0.378 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61809503 | ss | TG | 4.772 | 15 | TT | 0.158 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123978944 | ds | GG | Un | 81 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50528390 | ss | GG | 25.19 | 45 | TG | 0 | AG | 1.071 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23279141 | ss | TG | 3.525 | 13 | GG | 0.46 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51979799 | ds | GG | Un | 79 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154452951 | ds | CC | Un | 13 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33785859 | ss | TG | 27.381 | 115 | TT | 11.942 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116891581 | ss | TG | 42.014 | 183 | GG | 0.166 | AG | 0.092 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34385979 | ss | TG | 23.107 | 107 | TT | 12.921 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61664547 | ds | AG | 4.224 | 40 | GG | 4.739 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59988880 | ds | AG | 34.04 | 205 | GG | 7.941 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:8997201 | ss | AA | 13.321 | 25 | AT | 5.725 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102413538 | ss | TG | 2.574 | 17 | GG | 2.35 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611850 | ss | GG | 10.537 | 26 | TG | 6.239 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:3056395 | ss | AT | 4.772 | 15 | AA | 0.158 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:256189 | ss | TG | 9.369 | 45 | TT | 5.219 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106761786 | ds | AG | 1.33 | 32 | GG | 6.735 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:5101500 | ss | GG | 9.904 | 20 | TG | 4.564 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50750011 | ss | TG | 6.617 | 33 | GG | 3.956 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33066416 | ds | AG | 11.988 | 90 | AA | 7.917 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:149524915 | ss | AG | 151.894 | 1000 | GG | 23.661 | TG | 0.721 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52223150 | ss | TG | 10.095 | 39 | TT | 3.001 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33793673 | ss | GG | 4.599 | 11 | TG | 2.17 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61462991 | ss | TG | 5.392 | 26 | TT | 2.817 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18516918 | ss | GG | Un | 39 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:62348319 | ds | AG | 5.15 | 43 | AA | 4.259 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34191637 | ds | CC | 10.749 | 21 | TC | 85.601 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60386979 | ds | AG | 1.388 | 36 | GG | 7.418 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46682167 | ss | AG | 23.059 | 76 | GG | 4.093 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1670254 | ss | GG | 78.526 | 284 | TG | 14.166 | AG | 0.866 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2487728 | ss | AA | 9.416 | 105 | AT | 27.94 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67919646 | ss | AG | 23.655 | 73 | TG | 0.13 | AT | 0.34 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860703 | ds | TC | 2.793 | 68 | TT | 1.865 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:37024598 | ss | TG | 12.983 | 50 | GG | 0.816 | AG | 0.113 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49705888 | ss | GG | 6.934 | 33 | AG | 2.02 | TG | 0.788 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48560146 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377107 | ds | GG | 71.858 | 225 | AG | 57.881 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6732189 | ss | TG | 49.626 | 841 | GG | 93.179 | AG | 0.631 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:773678 | ss | GG | 20.283 | 35 | AG | 8.051 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468087 | ss | AA | 7.733 | 44 | AG | 11.27 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355101 | ss | AG | 3.507 | 35 | GG | 6.217 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62131496 | ds | CC | 4.056 | 13 | TC | 18.461 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33343960 | ds | AG | 42.892 | 1266 | GG | 272.167 | CG | 3.38 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61666116 | ds | TC | 9.482 | 113 | TT | 0.773 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29684260 | ss | AT | 2.291 | 25 | AA | 1.589 | AG | 0.417 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12919920 | ss | GG | 43.316 | 114 | TG | 27.718 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61877085 | ds | TC | 1.09 | 19 | CC | 8.188 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49706431 | ss | AA | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:60053754 | ss | TG | 4.912 | 23 | GG | 2.339 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44033246 | ss | GG | Un | 21 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61421934 | ds | CC | 15.907 | 29 | AC | 13.088 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:41164367 | ds | CG | 11.426 | 43 | GG | 3.946 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30768941 | ss | GG | Un | 34 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452529 | ds | GG | 154.369 | 446 | AG | 84.084 | TG | 6.637 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6613711 | ss | GG | Un | 29 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:63802025 | ds | CG | 3.441 | 53 | CC | 2.915 | TC | 2.095 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191099148 | ds | CC | 61.964 | 205 | CG | 62.842 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131924356 | ds | CC | 21.415 | 13 | TC | 15.212 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:125777009 | ss | AT | 19.646 | 59 | AA | 1.417 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22750067 | ss | AA | 19.568 | 34 | AG | 7.824 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669106 | ss | GG | Un | 57 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12761239 | ss | AT | 8.007 | 25 | AA | 0.466 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108076866 | ss | AG | 2.166 | 11 | AA | 0.019 | AT | 0.181 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47975864 | ss | TG | 8.125 | 41 | GG | 4.92 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrY:10646088 | ss | GG | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61692210 | ss | AG | 33.471 | 185 | AT | 0.195 | TG | 11.463 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61450004 | ss | TG | 1.853 | 39 | GG | 3.96 | AG | 0.462 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50938875 | ds | AA | Un | 12 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61798897 | ss | AG | 4.077 | 26 | AA | 0.829 | AT | 0.191 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26136782 | ss | AG | 24.384 | 105 | AT | 0.566 | TG | 4.072 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146124 | ss | GG | 46.636 | 170 | TG | 9.47 | AG | 0.759 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136316 | ds | GG | 123.61 | 134 | CG | 1.624 | TG | 33.877 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132729041 | ds | CC | Un | 16 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61508721 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:432823 | ss | AA | 8.252 | 57 | AG | 1.775 | AT | 1.976 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44084617 | ds | TG | 32.886 | 13 | GG | 41.763 | CG | 1.612 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:35582588 | ds | TT | 53.656 | 85 | TC | 59.298 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42272875 | ss | AG | 50.418 | 297 | GG | 3.922 | TG | 0.661 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:62348399 | ss | AG | 19.126 | 62 | AA | 2.838 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51554277 | ss | AG | 26.621 | 171 | GG | 9.679 | TG | 0.432 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:5573833 | ss | AA | 3.345 | 14 | AT | 0 | AG | 0.501 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48203975 | ss | AT | 3.37 | 32 | TT | 5.733 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116939216 | ds | CG | 11.34 | 53 | CC | 10.512 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138221 | ss | GG | 6.688 | 27 | TG | 1.33 | AG | 0.807 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061881 | ds | TC | 65.655 | 163 | CC | 2.406 | TT | 45.11 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94860525 | ss | TG | 47.865 | 367 | TT | 22.75 | AT | 0.401 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131995480 | ss | AT | 22.076 | 86 | AA | 7.616 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039862 | ds | TC | 6.402 | 139 | TT | 10.637 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38999827 | ss | TG | 21.233 | 74 | GG | 4.744 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:10012626 | ss | AG | 5.016 | 17 | AA | 0.461 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:49993338 | ss | AT | 3.473 | 23 | TT | 3.3 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107499714 | ds | AT | 44.072 | 223 | TT | 46.544 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:32003559 | ss | TG | 3.57 | 14 | TT | 1.224 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45511338 | ds | TC | 2.306 | 15 | TT | 6.815 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21482055 | ss | TG | 13.001 | 60 | GG | 6.962 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14819261 | ss | AG | 6.168 | 28 | AA | 2.819 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61869379 | ds | TT | 4.34 | 55 | TC | 10.052 | CC | 7.217 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124734424 | ds | TT | Un | 110 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129189189 | ds | AA | 1.553 | 13 | AG | 2.991 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378305 | ss | AG | 17.839 | 57 | AA | 2.664 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:54789386 | ds | TG | 29.706 | 100 | TT | 4.271 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:45569126 | ss | AG | 3.325 | 22 | GG | 0.643 | TG | 0.182 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67945580 | ss | AG | 15.134 | 117 | GG | 10.121 | TG | 0.218 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:57200438 | ss | TG | 11.284 | 47 | GG | 4.561 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:62348290 | ds | AC | 7.528 | 49 | AA | 12.031 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61671304 | ds | GG | Un | 83 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60415894 | ss | TG | 3.289 | 45 | TT | 8.874 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131254232 | ds | AG | 4.951 | 30 | GG | 0.936 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:71175341 | ss | GG | 23.922 | 41 | AG | 9.441 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:43730531 | ss | GG | Un | 60 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8062938 | ds | AG | 2.949 | 30 | GG | 4.077 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10155537 | ds | CG | 27.466 | 479 | GG | 41.973 | AG | 1.725 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131562835 | ds | TC | 6.831 | 60 | TT | 2.358 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164538 | ds | GG | 50.361 | 145 | AG | 33.319 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:126331300 | ds | AA | Un | 55 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59956920 | ds | CC | 5.02 | 68 | TC | 17.466 | TT | Un |