Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1254292 | ss | AG | 4.286 | 16 | GG | 0.923 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46878606 | ds | TC | 1.683 | 18 | CC | 2.814 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:134895025 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103375700 | ss | AT | 53.95 | 273 | TT | 11.915 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50930663 | ss | TG | 21.283 | 63 | GG | 1.418 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2732179 | ss | AA | 37.054 | 82 | AT | 18.889 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:74071367 | ds | TC | 7.57 | 722 | CC | 0.941 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812184 | ds | AG | 12.328 | 71 | AA | 1.42 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225961 | ds | TC | 6.041 | 377 | TT | 0.167 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131482881 | ds | AG | 34.405 | 196 | GG | 3.806 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48560145 | ss | GG | Un | 24 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:13046057 | ss | TG | 3.37 | 32 | TT | 5.733 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36788243 | ss | AT | 9.024 | 32 | TT | 1.877 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693682 | ss | AG | 4.407 | 29 | GG | 4.262 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:689847 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28226024 | ss | TG | 40.376 | 396 | GG | 68.869 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56374004 | ss | GG | Un | 40 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493873 | ss | GG | Un | 38 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:1793147 | ss | GG | Un | 109 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61502479 | ss | TG | 20.858 | 65 | TT | 2.365 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56354838 | ss | AA | Un | 81 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52356070 | ds | AG | 16.258 | 95 | AA | 2.371 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5244651 | ss | TG | 16.996 | 49 | TT | 0.471 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3610736 | ss | AG | 6.339 | 32 | GG | 3.776 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:70131204 | ss | TG | 26.732 | 75 | TT | 0.473 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18436754 | ss | GG | Un | 90 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600322 | ds | GG | Un | 20 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67944736 | ds | TC | 127.118 | 188 | CC | 48.841 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191180357 | ss | TG | 23.101 | 75 | GG | 0.557 | AG | 0.161 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131466825 | ds | AG | 5.867 | 40 | GG | 2.527 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106821803 | ds | CG | 6.752 | 34 | GG | 0.975 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100657542 | ss | GG | 9.176 | 19 | TG | 0.891 | AG | 0.41 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51686707 | ds | GG | Un | 90 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46686557 | ss | AG | 18.731 | 61 | AA | 3.012 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75682550 | ss | GG | Un | 24 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61674394 | ss | AG | 8.096 | 40 | GG | 4.739 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:91060397 | ss | GG | 2.185 | 16 | TG | 3.786 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154453085 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108755734 | ss | AG | 38.633 | 236 | GG | 11.407 | TG | 0.21 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040279 | ds | TC | 49.221 | 45 | TT | 29.653 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1525927 | ds | GG | Un | 109 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34423551 | ss | AA | Un | 35 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280104 | ss | GG | 39.831 | 98 | AG | 2.76 | TG | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22753135 | ds | GG | Un | 141 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494908 | ss | GG | Un | 144 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26166822 | ss | AA | 64.321 | 147 | AT | 32.549 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61203814 | ds | GG | Un | 40 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54934339 | ds | TC | 6.195 | 788 | TT | 3.306 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49054556 | ds | TC | 3.787 | 87 | CC | 2.345 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600319 | ds | CC | Un | 20 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116077774 | ss | AG | 42.877 | 204 | GG | 8.572 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:73985647 | ds | TT | 2.054 | 91 | TC | 4.541 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:61830476 | ss | GG | 43.635 | 100 | AG | 23.017 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:37793351 | ss | TG | 5.365 | 35 | GG | 5.227 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59833766 | ss | AA | 4.774 | 20 | AG | 4.568 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60873775 | ss | AT | 28.938 | 112 | TT | 2.848 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51734587 | ss | AG | 17.795 | 51 | GG | 0.773 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19686581 | ss | GG | Un | 46 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8993842 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:56754175 | ss | TG | 30.027 | 136 | TT | 4.894 | AT | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50580753 | ds | CG | 32.555 | 112 | CC | 5.137 | TG | 4.035 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52960502 | ds | AG | 52.261 | 280 | AA | 0.477 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31245144 | ss | GG | Un | 109 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45957462 | ss | AG | 3.57 | 14 | GG | 1.224 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4011137 | ss | GG | Un | 63 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54722196 | ds | CG | 13.955 | 18 | GG | 1.59 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120840818 | ss | AG | 7.985 | 31 | GG | 2.347 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129869085 | ds | AG | 9.904 | 71 | GG | 5.22 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039779 | ss | TG | 7.258 | 23 | TT | 0.465 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59429798 | ss | GG | 28.371 | 71 | AG | 17.476 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34125431 | ss | AG | 34.643 | 151 | AA | 5.883 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48012984 | ss | AA | Un | 42 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131519917 | ss | GG | 50.239 | 118 | TG | 27.143 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112015282 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355119 | ss | AT | 10.095 | 39 | AA | 3.001 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131760191 | ss | AG | 49.744 | 252 | GG | 12.393 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47605067 | ss | AG | 35.657 | 161 | GG | 4.004 | TG | 0.063 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:130144304 | ss | GG | 23.807 | 40 | AG | 9.214 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61348402 | ss | AG | 7.22 | 29 | GG | 2.346 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122016971 | ss | GG | Un | 74 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138090 | ss | AG | 2.724 | 72 | GG | 16.617 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:207969 | ss | TG | 55.078 | 248 | GG | 1.904 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136508 | ds | TC | 66.071 | 19 | TT | 11.916 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153280339 | ss | TG | 27.682 | 119 | TT | 4.03 | AT | 0.079 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61451438 | ss | AG | 11.75 | 35 | GG | 0.469 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131577546 | ss | AG | 12.006 | 50 | GG | 2.603 | TG | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122635620 | ss | AG | 13.308 | 45 | GG | 2.358 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60873883 | ds | AG | 17.206 | 114 | GG | 6.658 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2670910 | ss | AA | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:30815284 | ds | AT | 12.667 | 52 | AA | 23.52 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21545736 | ds | TG | 10.277 | 782 | CG | 142.483 | TT | 3.81 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012312 | ds | AC | 15.953 | 50 | CC | 8.354 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120723457 | ss | AA | Un | 55 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424809 | ds | CC | Un | 81 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27249008 | ss | AA | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34924447 | ss | AG | 9.024 | 32 | AA | 1.877 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173962 | ds | CC | Un | 19 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9492019 | ss | TG | 3.37 | 32 | GG | 5.733 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31244811 | ss | GG | 23.087 | 39 | AG | 8.687 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173932 | ds | TT | Un | 18 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2030781 | ss | TG | 15.572 | 51 | TT | 2.36 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119291089 | ss | TG | 1.781 | 15 | GG | 2.376 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60151076 | ss | TG | 86.074 | 408 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14814176 | ss | AT | 7.907 | 36 | TT | 4.078 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123968644 | ss | AT | 36.636 | 180 | TT | 11.44 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:92385384 | ss | AG | 2.508 | 12 | GG | 0.93 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102874981 | ss | AT | 17.895 | 62 | TT | 3.788 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61463671 | ss | TG | 3.37 | 32 | TT | 5.733 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120745839 | ss | AG | 27.847 | 114 | GG | 11.459 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:22977478 | ss | AA | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52727765 | ss | AA | Un | 72 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131796967 | ss | AG | 29.014 | 97 | GG | 1.481 | TG | 0.248 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6513577 | ds | TC | 2.328 | 105 | TT | 1.557 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:143331850 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44374852 | ss | AT | 5.684 | 25 | AA | 2.341 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119451304 | ss | GG | 203.675 | 530 | TG | 120.78 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:121551010 | ss | TG | 10.711 | 49 | GG | 5.219 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1845064 | ds | GG | 123.81 | 203 | TG | 74.142 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131406628 | ss | AG | 5.836 | 78 | AA | 16.53 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10767326 | ss | AT | 11.293 | 38 | TT | 1.881 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30214783 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61853435 | ss | GG | Un | 62 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130980722 | ss | AA | Un | 104 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61657631 | ds | TC | 28.522 | 214 | TT | 6.662 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1047523 | ss | GG | 128.413 | 318 | TG | 71.241 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103375653 | ss | TG | 133.078 | 803 | GG | 22.861 | AG | 0.123 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55100693 | ss | AG | 2.082 | 20 | AA | 3.819 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100560436 | ds | TC | 15.327 | 107 | CC | 2.544 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:22980061 | ss | TG | 2.166 | 14 | TT | 2.182 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1194914 | ss | TG | 7.009 | 25 | GG | 1.4 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:134895012 | ss | AA | Un | 25 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56214069 | ss | AG | 17.647 | 63 | AA | 4.265 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30245242 | ss | AG | 2.316 | 22 | AA | 3.807 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50913835 | ss | AT | 1.927 | 23 | AA | 4.313 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33320048 | ss | GG | Un | 68 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100794964 | ss | AA | 56.449 | 126 | AG | 27.811 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2659140 | ss | AG | 25.876 | 85 | GG | 2.872 | TG | 0.004 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132751217 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136262 | ss | AT | 24.397 | 92 | TT | 7.615 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36788219 | ss | AT | 15.498 | 45 | TT | 0.471 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51645663 | ss | TG | 37.607 | 182 | TT | 10.482 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:174666171 | ss | TG | 6.51 | 21 | TT | 0.464 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52653328 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47605537 | ss | AG | 20.786 | 86 | GG | 8.579 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9491798 | ds | GG | Un | 238 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59360357 | ss | TG | 6.168 | 28 | TT | 2.819 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123376921 | ss | AA | Un | 152 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102884112 | ss | TG | 4.286 | 16 | GG | 0.923 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75983197 | ss | AG | 9.077 | 46 | AA | 5.702 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144645 | ss | AA | Un | 42 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:126382647 | ss | AG | 3.525 | 13 | AA | 0.46 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6703365 | ss | GG | 31.642 | 59 | AG | 12.445 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61463829 | ss | AG | 2.631 | 34 | GG | 6.734 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:28128749 | ds | TT | 30.881 | 647 | TC | 21.184 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:156510422 | ss | GG | Un | 57 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55916404 | ss | AA | 25.946 | 43 | AG | 9.904 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38931524 | ss | AT | 15.626 | 51 | AG | 0.16 | TG | 0.171 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2030767 | ss | AG | 15.605 | 56 | AA | 3.786 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41728793 | ss | AA | 72.749 | 179 | AG | 1.786 | AT | 0.469 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138192 | ss | TG | 2.082 | 20 | TT | 3.819 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491707 | ss | AA | Un | 23 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131859966 | ds | GG | Un | 48 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131358770 | ss | TG | 6.51 | 21 | TT | 0.464 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860835 | ss | AA | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44374845 | ss | TG | 3.473 | 23 | GG | 3.3 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061824 | ds | TG | 126.083 | 69 | GG | 64.224 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1830797 | ss | AG | 29.052 | 105 | AA | 0.474 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50925569 | ds | CC | 56.286 | 98 | CG | 36.021 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47010051 | ss | AA | Un | 90 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1875775 | ss | AG | 37.009 | 156 | GG | 3.502 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131167549 | ds | AG | 3.73 | 36 | AA | 4.438 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4300822 | ss | TG | 80.031 | 424 | GG | 16.213 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34398704 | ss | AA | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:61312267 | ss | TG | 16.636 | 62 | TT | 4.741 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225962 | ds | AG | 50.293 | 393 | AA | 39.357 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61189376 | ds | CC | Un | 19 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43973971 | ss | TG | 10.661 | 50 | GG | 6.001 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:31790426 | ss | TG | 3.825 | 22 | GG | 2.817 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860714 | ds | AA | Un | 18 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61225424 | ds | AG | 8.009 | 60 | GG | 5.042 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834212 | ss | TG | 52.148 | 268 | TT | 13.349 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26136912 | ds | AC | 4.208 | 21 | AA | 4.687 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27288275 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12762366 | ss | TG | 219.423 | 1134 | TT | 2.63 | AT | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:8997198 | ss | AA | Un | 21 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120811195 | ss | AG | 2.482 | 13 | GG | 1.398 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:46261280 | ss | AT | 2.359 | 39 | TT | 8.223 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30222121 | ss | TG | 176.486 | 1023 | TT | 45.352 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136577 | ss | TG | 39.63 | 179 | GG | 6.186 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1254270 | ss | AT | 7.263 | 24 | AA | 0.931 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131169532 | ds | TC | 13.152 | 170 | CC | 3.794 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61131226 | ss | TG | 1.781 | 15 | GG | 2.376 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1254531 | ss | TG | 16.328 | 53 | TT | 2.662 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:16503547 | ss | TG | 30.823 | 122 | GG | 2.849 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:126197024 | ss | TG | 44.541 | 211 | TT | 8.095 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:9344079 | ss | GG | Un | 38 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8265254 | ss | GG | Un | 23 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23350049 | ss | TG | 6.339 | 32 | GG | 3.776 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60962672 | ss | AG | 5.064 | 27 | AA | 3.296 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066740 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124412 | ss | AG | 9.417 | 28 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:71182645 | ss | GG | 9.904 | 20 | TG | 4.564 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:155405373 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59988031 | ds | TG | 8.87 | 58 | CG | 9.747 | TT | 0.658 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153397701 | ss | TG | 6.256 | 23 | TT | 1.398 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280195 | ss | AT | 4.772 | 15 | TT | 0.158 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693714 | ss | AG | 14.614 | 47 | AA | 1.155 | AT | 0.09 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59385494 | ss | TG | 30.995 | 159 | TT | 13.846 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136613 | ss | AG | 36.61 | 163 | GG | 6.185 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355247 | ss | AA | Un | 49 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164585 | ss | GG | 34.141 | 74 | AG | 17.052 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:99634816 | ds | TC | 7.038 | 269 | TT | 4.74 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21546098 | ds | TG | 110.847 | 494 | GG | 1.733 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31248148 | ds | GG | Un | 22 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:100360216 | ss | AA | 29.207 | 41 | AT | 8.732 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:3057185 | ss | GG | 52.701 | 116 | TG | 25.557 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36534842 | ss | AG | 3.37 | 32 | GG | 5.733 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468933 | ss | GG | 105.175 | 256 | TG | 57.199 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45759609 | ds | TC | 15.657 | 76 | CC | 11.454 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215443 | ss | TG | 27.481 | 77 | GG | 0.473 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1975025 | ss | GG | 4.849 | 21 | AG | 5.066 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728423 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1830526 | ss | AG | 75.203 | 364 | AA | 0.389 | AT | 0.033 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107478953 | ss | AA | 8.48 | 17 | AG | 3.572 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1847860 | ss | AA | Un | 65 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131086558 | ss | AG | 11.293 | 38 | AA | 1.881 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56155849 | ds | CC | Un | 11 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:127755894 | ss | AG | 32.107 | 100 | AA | 3.798 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21443636 | ss | AT | 2.784 | 11 | AA | 0.462 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4689710 | ss | TG | 6.941 | 30 | TT | 2.82 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131484732 | ss | AG | 21.819 | 87 | GG | 8.097 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59032679 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8286929 | ss | TG | 64.658 | 295 | TT | 0.476 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2939700 | ss | GG | Un | 58 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124470 | ss | AG | 20.328 | 62 | GG | 1.891 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17543329 | ss | AA | 78.919 | 204 | AG | 47.57 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:75801137 | ss | AG | 2.127 | 31 | GG | 3.708 | TG | 0.205 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635678 | ss | AA | Un | 24 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4541872 | ss | TG | 50.057 | 289 | GG | 23.421 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3697013 | ss | TG | 3.473 | 23 | TT | 3.3 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:70131215 | ss | AG | 12.59 | 44 | TG | 0.094 | AT | 0.104 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46439659 | ss | AA | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:43502256 | ss | AA | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146065 | ss | AG | 22.815 | 77 | GG | 4.268 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93568292 | ss | GG | Un | 133 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115430690 | ss | GG | Un | 25 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61692054 | ds | TC | 25.176 | 12 | CC | 0.95 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34242811 | ss | GG | 144.564 | 382 | TG | 88.414 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61496892 | ds | TC | 40.667 | 126 | CC | 8.573 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:141514465 | ss | AG | 3.034 | 20 | AA | 2.823 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61131294 | ss | TG | 2.784 | 11 | TT | 0.462 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54012250 | ss | TG | 30.92 | 149 | GG | 10.964 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:91071253 | ss | AG | 6.469 | 30 | GG | 0.503 | TG | 0.143 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50875542 | ss | AG | 13.6 | 43 | AA | 1.412 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131530037 | ss | AT | 7.154 | 43 | TT | 6.191 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120715956 | ss | AA | Un | 45 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61463650 | ss | AG | 2.24 | 35 | GG | 7.243 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812678 | ss | AT | 115.512 | 569 | AA | 0.952 | AG | 0.021 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60345353 | ss | AA | Un | 104 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50694689 | ss | GG | Un | 68 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6513590 | ds | TC | 4.169 | 104 | TT | 2.347 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138040 | ss | GG | Un | 35 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61590319 | ss | AG | 27.311 | 108 | GG | 2.239 | AT | 0.069 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59396532 | ss | TG | 5.215 | 31 | TT | 4.258 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:7199825 | ss | AG | 2.551 | 29 | AA | 5.563 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:158364282 | ss | AG | 6.518 | 22 | GG | 0.93 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41653245 | ss | AG | 45.782 | 261 | AA | 9.969 | AT | 0.177 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61061345 | ss | AG | 2.098 | 57 | GG | 13.189 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452568 | ds | GG | 148.285 | 301 | TG | 92.899 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115961279 | ss | TG | 3.672 | 19 | TT | 2.037 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424891 | ss | AG | 19.973 | 58 | AA | 0.944 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61204849 | ss | AA | Un | 198 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56850155 | ss | GG | 4.774 | 20 | AG | 4.568 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47495105 | ss | TG | 27.035 | 130 | GG | 11.45 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2136163 | ss | AT | 25.646 | 80 | AA | 3.144 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:15426817 | ss | AT | 1.07 | 21 | TT | 4.386 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48584201 | ss | AA | Un | 26 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123422571 | ss | GG | 76.451 | 189 | TG | 43.372 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47396849 | ss | TG | 40.382 | 189 | TT | 8.094 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48032968 | ss | TG | 12.55 | 43 | GG | 2.356 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:13045390 | ss | TG | 1.726 | 11 | TT | 1.42 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294194 | ds | CC | Un | 197 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93921683 | ss | GG | Un | 18 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7233610 | ss | TG | 2.346 | 21 | AG | 0.472 | AT | 1.177 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:85790686 | ss | TG | 3.825 | 22 | GG | 2.817 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54401300 | ss | AA | 156.42 | 434 | AG | 102.92 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102848312 | ss | TG | 11.75 | 35 | TT | 0.469 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46565494 | ss | GG | 9.247 | 19 | AG | 4.323 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131994795 | ss | AG | 28.667 | 80 | GG | 0.646 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61317513 | ss | GG | Un | 104 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173927 | ds | TC | 6.066 | 22 | CC | 3.782 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30671669 | ds | AG | 5.292 | 29 | AA | 0.166 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2030732 | ss | TG | 12.008 | 50 | GG | 4.739 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138102 | ss | GG | Un | 86 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56299442 | ds | AG | 2.341 | 16 | GG | 0.922 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56156422 | ss | AT | 10.064 | 40 | AA | 3.479 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36996790 | ds | AA | 147.002 | 393 | AG | 87.937 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115961487 | ss | AG | 24.09 | 72 | AA | 1.893 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:484196 | ss | AA | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129189268 | ss | AG | 57.598 | 313 | AA | 10.017 | AT | 0.067 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59928619 | ss | AG | 1.909 | 18 | AT | 0.405 | TG | 0.351 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45956944 | ss | AG | 2.544 | 15 | AA | 0.077 | AT | 0.342 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131395576 | ds | GG | Un | 454 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102884061 | ss | AT | 5.092 | 19 | AA | 1.091 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59384335 | ss | AG | 64.895 | 319 | GG | 4.459 | TG | 0.042 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3162819 | ds | TG | 6.337 | 16 | GG | 0.942 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362078 | ds | TG | 56.231 | 273 | GG | 5.99 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493555 | ss | TG | 33.938 | 155 | GG | 8.092 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61666697 | ds | AC | 16.686 | 97 | CC | 1.216 | CG | 6.887 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:32204967 | ss | TG | 2.784 | 11 | GG | 0.462 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61869269 | ss | AA | Un | 62 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:77421990 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611633 | ds | TT | Un | 44 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:13045372 | ss | AT | 2.508 | 12 | TT | 0.93 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1830842 | ss | AG | 29.562 | 156 | GG | 8.529 | AT | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:77393268 | ss | TG | 2.166 | 14 | GG | 2.182 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29655754 | ss | TG | 49.543 | 214 | TT | 0.474 | AT | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131475953 | ss | AG | 44.102 | 203 | AA | 1.64 | AT | 0.105 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4890696 | ss | AA | 40.705 | 92 | AG | 21.184 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:19721067 | ss | AG | 6.51 | 21 | GG | 0.464 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54400972 | ds | GG | Un | 30 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21545911 | ds | AA | 104.115 | 290 | AG | 66.414 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4751592 | ss | TG | 8.722 | 39 | TT | 3.957 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33418284 | ds | CG | 45.051 | 178 | GG | 2.871 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132268173 | ss | AG | 57.916 | 266 | AA | 1.482 | AT | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113363453 | ds | AG | 3.832 | 24 | AA | 0.931 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56301761 | ss | AA | Un | 30 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59738176 | ss | GG | Un | 24 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:44947546 | ds | GG | Un | 64 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3022040 | ds | AA | Un | 32 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46565536 | ss | AG | 7.17 | 22 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132217594 | ss | TG | 27.062 | 122 | GG | 14.36 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46684269 | ss | GG | 51.951 | 114 | TG | 25.106 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154452973 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:57032797 | ss | AG | 53.929 | 330 | GG | 13.665 | TG | 0.093 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52646696 | ss | GG | Un | 22 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6514188 | ss | AT | 4.175 | 14 | TT | 0 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040097 | ss | AG | 9.833 | 37 | AA | 1.552 | AT | 0.117 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33524116 | ss | TG | 5.029 | 18 | GG | 0.925 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491733 | ss | GG | Un | 50 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46878294 | ss | AG | 3.825 | 22 | GG | 2.817 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:100650350 | ss | AA | 5.198 | 12 | AT | 2.418 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131432382 | ss | GG | Un | 128 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48003049 | ss | GG | 65.722 | 160 | TG | 36.749 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1776247 | ss | GG | Un | 21 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122284254 | ss | AA | 97.304 | 235 | AT | 52.445 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27133275 | ds | TT | Un | 167 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23917285 | ss | GG | Un | 37 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54980528 | ss | AA | Un | 47 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26137824 | ss | GG | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:73985654 | ds | TT | 1.814 | 114 | TC | 3.496 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130859547 | ds | CG | 41.639 | 42 | CC | 8.063 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153235392 | ds | TC | 10.167 | 164 | TT | 5.699 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29774919 | ss | TG | 12.436 | 42 | GG | 1.883 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59927649 | ss | GG | Un | 85 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61667251 | ds | CC | Un | 86 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42231632 | ss | GG | Un | 51 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834233 | ss | AG | 77.026 | 395 | GG | 11.916 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136366 | ds | TC | 40.106 | 58 | TT | 9.527 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123467805 | ss | AA | 26.192 | 37 | AG | 7.845 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123495917 | ss | AA | 103.531 | 262 | AG | 60.03 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2279774 | ss | TG | 5.859 | 38 | TT | 5.711 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55367784 | ss | GG | Un | 47 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066829 | ds | AT | 15.304 | 42 | TT | 6.314 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669130 | ss | AG | 3.593 | 27 | GG | 4.268 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120840753 | ss | TG | 6.42 | 20 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173939 | ds | GG | Un | 18 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600354 | ss | GG | 31.788 | 51 | TG | 11.752 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49542387 | ds | AG | 2.707 | 27 | GG | 3.295 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47976604 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2768797 | ss | AG | 27.775 | 104 | AA | 8.573 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46013536 | ss | GG | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30214127 | ss | AA | 34.711 | 68 | AG | 14.763 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728464 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116983634 | ss | GG | 6.603 | 15 | TG | 3.384 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:39000101 | ss | AA | 77.739 | 182 | AT | 40.156 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31245783 | ss | GG | 47.3 | 110 | TG | 25.311 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1900284 | ss | AA | 49.872 | 117 | AG | 26.913 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57467469 | ss | AA | Un | 47 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132167383 | ss | AT | 9.871 | 50 | TT | 6.368 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56155767 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131635944 | ds | TT | Un | 14 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131760090 | ss | TG | 34.353 | 139 | TT | 2.376 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131248655 | ds | AG | 2.675 | 15 | AA | 0.158 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119661655 | ss | TG | 7.985 | 31 | GG | 2.347 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102875187 | ss | GG | 123.239 | 315 | TG | 72.112 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18516902 | ss | AA | 5.198 | 12 | AG | 2.418 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46565601 | ss | TG | 3.43 | 12 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123966760 | ss | AA | 248.893 | 659 | AT | 0 | AG | 2.518 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131577416 | ss | GG | Un | 36 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43974099 | ss | TG | 5.092 | 19 | GG | 1.091 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59368915 | ss | GG | 5.312 | 13 | TG | 2.915 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123966392 | ss | TG | 20.751 | 76 | GG | 5.699 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19141682 | ss | AG | 26.673 | 100 | GG | 3.149 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:87477444 | ss | TG | 35 | 138 | GG | 0.95 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138151 | ss | GG | 30.591 | 57 | TG | 12.298 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:70120552 | ds | TC | 1.233 | 43 | CC | 2.159 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36708275 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494909 | ss | GG | Un | 144 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93058017 | ds | CG | 7.221 | 16 | CC | 1.398 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56159513 | ss | AA | Un | 69 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1974912 | ss | AT | 3.43 | 12 | TT | 0 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:36019840 | ss | AG | 7.258 | 23 | AA | 0.465 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51583861 | ss | GG | Un | 32 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132747056 | ss | GG | 4.599 | 11 | AG | 2.17 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43366610 | ds | TC | 89.67 | 81 | CC | 0.477 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17896894 | ds | AA | Un | 72 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124136013 | ds | GG | 42.991 | 125 | AG | 28.744 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100325636 | ss | TG | 223.491 | 1168 | AT | 0.036 | AG | 1.426 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46879059 | ss | AA | Un | 145 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52714799 | ds | TT | Un | 22 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131445554 | ss | AA | Un | 20 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154452993 | ds | TT | Un | 14 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61671182 | ds | AG | 7.988 | 45 | AA | 0.471 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:196705231 | ss | AA | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61810559 | ss | GG | Un | 66 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:99417532 | ss | GG | 5.312 | 13 | AG | 2.915 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52625319 | ss | AA | Un | 38 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21986082 | ss | AG | 6.633 | 31 | GG | 3.297 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44240050 | ss | AA | 29.069 | 60 | AG | 1.623 | AT | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30866736 | ss | AT | 7.652 | 46 | TT | 6.675 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:157590631 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132747441 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61107499 | ds | TC | 13.574 | 33 | TT | 9.41 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48032427 | ss | AG | 4.175 | 14 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43355817 | ss | AG | 23.848 | 73 | GG | 1.46 | TG | 0.069 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:16758002 | ss | GG | 2.21 | 11 | AG | 2.26 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860771 | ds | AA | 2.698 | 17 | AG | 3.997 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123978944 | ds | GG | Un | 35 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50528390 | ss | GG | 17.459 | 26 | TG | 0 | AT | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154452951 | ds | CC | Un | 11 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23279141 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130120941 | ss | AG | 4.859 | 85 | GG | 19.032 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51979799 | ds | GG | Un | 77 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124469 | ss | AT | 20.599 | 59 | TT | 0.472 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:657132 | ss | AT | 2.687 | 13 | TG | 0 | AG | 0.773 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36996850 | ss | AA | 8.947 | 14 | AT | 2.829 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34385979 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61664547 | ds | AG | 1.311 | 22 | AA | 3.788 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59988880 | ss | AG | 22.076 | 86 | AA | 7.616 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:8997201 | ss | AA | Un | 20 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611850 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33784173 | ds | TC | 27.323 | 77 | CC | 10.181 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5245172 | ds | TG | 26.815 | 146 | GG | 3.854 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106761786 | ds | AA | Un | 16 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33066416 | ds | GG | 89.794 | 136 | CG | 58.913 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:149524915 | ss | AG | 54.537 | 381 | GG | 44.663 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52223150 | ss | TG | 8.754 | 27 | GG | 0.467 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61145694 | ss | TG | 22.384 | 84 | TT | 6.656 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61462991 | ss | TG | 4.277 | 17 | GG | 1.089 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10155536 | ds | TC | 6.836 | 444 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45957573 | ss | TG | 4.277 | 17 | TT | 1.089 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18516918 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60403281 | ss | AT | 62.13 | 310 | AA | 10.483 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61568435 | ss | AG | 13.041 | 51 | GG | 4.261 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29656732 | ss | TG | 5.092 | 19 | TT | 1.091 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21438151 | ss | TG | 27.506 | 98 | GG | 1.249 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29901183 | ss | GG | 306.826 | 794 | AG | Un | TG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46682167 | ss | AA | Un | 56 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1670254 | ss | GG | 142.282 | 355 | TG | 79.625 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2487728 | ss | AA | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67919646 | ss | AG | 9.369 | 45 | AA | 5.219 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46878624 | ds | CG | 11.545 | 54 | CC | 2.526 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2592685 | ss | AT | 19.224 | 56 | AA | 0.944 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860703 | ds | TT | Un | 21 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49705888 | ss | AG | 1.726 | 11 | GG | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48560146 | ss | GG | Un | 24 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377107 | ss | GG | 91.681 | 220 | TG | 49.051 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49818228 | ss | AG | 28.519 | 111 | GG | 3.323 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468087 | ss | AA | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355101 | ss | AG | 4.277 | 17 | GG | 1.089 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2399451 | ds | TG | 6.006 | 17 | GG | 4.703 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:30502436 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12919920 | ss | GG | Un | 18 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107047883 | ss | AG | 48.941 | 224 | AA | 4.76 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102884062 | ss | TG | 5.502 | 21 | TT | 1.395 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68419623 | ss | AT | 27.287 | 79 | AA | 1.421 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61421934 | ds | CC | Un | 14 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59972906 | ss | GG | Un | 27 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452529 | ds | GG | 77.36 | 208 | AG | 34.832 | TG | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123968066 | ss | TG | 9.485 | 35 | GG | 1.453 | AG | 0.108 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94776183 | ss | TG | 15.665 | 60 | TT | 5.042 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22750067 | ss | AA | Un | 42 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669106 | ss | GG | Un | 34 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131804304 | ds | TG | 8.696 | 26 | GG | 3.081 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrY:10646088 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61450004 | ss | GG | Un | 20 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26136782 | ss | AG | 12.727 | 57 | GG | 3.578 | TG | 0.127 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146124 | ss | GG | 65.821 | 165 | TG | 0 | AG | 1.917 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119320276 | ss | AA | 6.517 | 24 | AG | 5.852 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33066456 | ds | GG | Un | 62 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136316 | ds | AG | 20.143 | 131 | GG | 7.136 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33201416 | ss | GG | 5.934 | 14 | AG | 3.16 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:432823 | ss | AA | 9.552 | 34 | AG | 8.264 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44084617 | ss | AT | 28.182 | 93 | AG | 0.22 | TG | 0.533 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:35582588 | ds | TT | Un | 78 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113363455 | ds | AG | 3.312 | 23 | GG | 1.397 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51554277 | ss | AA | Un | 58 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48203975 | ss | AT | 2.166 | 14 | AA | 2.182 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116939216 | ds | CG | 6.722 | 21 | GG | 7.799 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2939597 | ss | TG | 6.982 | 39 | GG | 5.223 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132073327 | ss | AG | 1.18 | 42 | AA | 9.805 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061881 | ds | TC | 117.683 | 134 | TT | 1.43 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039862 | ds | TT | Un | 162 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:153836082 | ss | AG | 6.256 | 23 | AA | 1.398 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38999827 | ss | GG | 132.916 | 341 | TG | 78.037 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14819261 | ss | AG | 12.304 | 44 | GG | 2.831 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61869379 | ds | TT | Un | 45 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124734424 | ss | TG | 25.952 | 84 | TT | 3.794 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378305 | ss | AG | 8.282 | 44 | GG | 5.703 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153280690 | ds | CG | 40.545 | 173 | GG | 9.501 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:45569126 | ss | GG | Un | 39 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119368711 | ss | AA | 39.974 | 90 | AG | 1.491 | TG | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61671304 | ds | AG | 2.309 | 25 | AA | 3.294 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60415894 | ss | TG | 5.092 | 19 | TT | 1.091 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:71175341 | ss | GG | Un | 81 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30671684 | ds | TC | 14.417 | 19 | CC | 7.136 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59936745 | ds | GG | Un | 97 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44240134 | ds | AA | Un | 86 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:171557068 | ds | AA | Un | 17 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132742587 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131562835 | ds | TT | Un | 86 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164538 | ds | GG | Un | 74 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34263113 | ds | CC | 35.642 | 138 | TC | 24.164 | TT | Un |