Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119938640 | ss | AT | 7.027 | 33 | AA | 0.892 | AG | 0.286 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:134895025 | ds | CC | 2.371 | 11 | TC | 6.282 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468352 | ss | TG | 23.094 | 87 | TT | 7.136 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50930663 | ss | TG | 33.028 | 141 | GG | 5.23 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2732179 | ss | AA | 79.374 | 218 | AG | 2.966 | AT | 0.982 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:74071367 | ds | TT | Un | 1006 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812184 | ds | AG | 20.817 | 118 | GG | 2.386 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225961 | ds | TC | 17.027 | 900 | TT | 0.477 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131612535 | ds | AA | 56.799 | 243 | AG | 55.555 | AC | 1.516 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:102758437 | ss | AA | Un | 27 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:7187933 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:30241521 | ss | AG | 5.671 | 18 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93067637 | ss | AG | 26.359 | 144 | GG | 4.479 | TG | 0.505 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129388424 | ss | AA | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36788243 | ss | AT | 6.751 | 26 | TT | 1.871 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693682 | ss | AA | 29.737 | 75 | AT | 18.438 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44094106 | ss | AT | 8.962 | 52 | AA | 7.341 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41978387 | ss | AA | 45.7 | 129 | AT | 1.182 | AG | 2.464 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56576545 | ss | AG | 17.574 | 91 | GG | 11.971 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:689847 | ss | AG | 26.711 | 137 | AA | 13.859 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:38547391 | ss | GG | 7.796 | 16 | AG | 3.349 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:157581614 | ss | TG | 37.972 | 160 | TT | 2.852 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56374004 | ss | TG | 19.646 | 59 | TT | 1.417 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:44670291 | ss | AG | 13.917 | 110 | GG | 6.666 | TG | 0.587 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493873 | ss | GG | Un | 40 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26158593 | ss | AG | 3.98 | 17 | TG | 0.11 | GG | 0.177 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59398567 | ss | AG | 5.641 | 36 | GG | 5.714 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:1793147 | ss | GG | Un | 231 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61502479 | ss | TG | 29.45 | 119 | GG | 4.576 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52356070 | ds | AG | 39.462 | 219 | AA | 3.35 | GG | 225.365 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378274 | ss | AT | 8.639 | 45 | TT | 0.913 | TG | 0.467 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36497049 | ds | CG | 8.545 | 77 | CC | 16.82 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5244651 | ss | TG | 4.022 | 38 | GG | 6.699 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18436754 | ss | GG | Un | 48 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600322 | ds | GG | Un | 13 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:157052050 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67944736 | ds | TT | 189.774 | 402 | TC | Un | TG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131645506 | ds | GG | 253.502 | 141 | CG | 5.626 | TG | 39.249 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1844881 | ss | TG | 83.304 | 430 | GG | 4.308 | AG | 0.042 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191180357 | ss | TG | 27.47 | 84 | AT | 0 | AG | 1.461 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:75801040 | ss | AG | 3.43 | 12 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106821803 | ds | CC | Un | 37 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:38238293 | ss | AG | 2.508 | 12 | AA | 0.93 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51686707 | ds | GG | Un | 92 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75682550 | ss | GG | Un | 59 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46686557 | ss | GG | 46.954 | 144 | TG | 36.43 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130895676 | ss | TG | 26.533 | 119 | TT | 13.878 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:75855733 | ss | TG | 3.034 | 20 | GG | 2.823 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:91060397 | ss | TG | 2.717 | 19 | GG | 0.399 | AG | 0.405 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59311003 | ss | GG | 96.475 | 243 | TG | 55.696 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:39698436 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108755734 | ss | GG | 134.175 | 370 | TG | 3.417 | AG | 1.498 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040279 | ds | TC | 27.261 | 24 | TT | 62.297 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1525927 | ds | AG | 52.872 | 324 | GG | 14.357 | AA | 0.84 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:157235564 | ss | AG | 9.825 | 35 | TG | 0.195 | GG | 0.003 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34423551 | ss | AG | 26.636 | 116 | GG | 2.496 | TG | 0.173 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:12542036 | ss | AG | 1.325 | 26 | TG | 0.91 | AT | 0.32 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280104 | ss | GG | 75.888 | 216 | AG | 3.936 | TG | 1.179 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22753135 | ds | GG | Un | 380 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5839872 | ss | AT | 1.726 | 11 | TT | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131818729 | ds | GG | 54.438 | 122 | CG | 46.79 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494908 | ss | GG | 44.238 | 136 | TG | 34.487 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29689453 | ss | AG | 17.874 | 64 | TG | 0.141 | AT | 2.098 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61203814 | ds | GG | Un | 89 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49054556 | ds | CC | Un | 295 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600319 | ds | CC | Un | 14 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:118726397 | ss | TG | 6.617 | 33 | GG | 3.956 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131240218 | ss | GG | 5.388 | 22 | AG | 5.334 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116077774 | ss | GG | 126.216 | 323 | AG | 73.935 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:73985647 | ds | TT | 16.152 | 169 | TC | 13.664 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:61830476 | ss | AG | 5.619 | 95 | GG | 10.311 | TG | 0.45 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6613779 | ss | AG | 8.007 | 25 | GG | 0.466 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:37793351 | ss | TG | 9.77 | 41 | TT | 3.957 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59833766 | ss | AA | 43.542 | 134 | AG | 33.718 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60873775 | ss | AT | 62.791 | 390 | TT | 15.772 | TG | 0.091 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51734587 | ss | AG | 14.532 | 45 | AA | 1.413 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191180311 | ss | GG | 14.499 | 47 | AG | 12.294 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52680764 | ss | AA | 14.463 | 33 | AT | 7.942 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46564940 | ss | AT | 2.166 | 14 | AA | 2.182 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19686164 | ds | TC | 1.233 | 37 | TT | 2.159 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19686581 | ss | TG | 18.543 | 53 | GG | 0.773 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59386975 | ss | GG | Un | 20 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112513973 | ss | GG | 13.995 | 26 | TG | 5.965 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:101868537 | ss | AT | 24.418 | 76 | AA | 2.842 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52960502 | ds | GG | 282.696 | 852 | AG | Un | TG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33418264 | ds | AG | 43.678 | 239 | AA | 3.366 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31245144 | ss | GG | 30.213 | 64 | TG | 14.752 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4011137 | ss | GG | 62.934 | 169 | TG | 40.323 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1830868 | ds | AG | 2.711 | 64 | GG | 13.59 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61028351 | ss | AA | 65.265 | 306 | AT | 19.176 | AG | 1.999 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47396490 | ss | TG | 32.763 | 143 | GG | 6.183 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129869085 | ds | AG | 31.557 | 250 | GG | 17.227 | TG | 0.199 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039779 | ss | TG | 4.276 | 68 | TT | 14.579 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59429798 | ss | GG | 27.92 | 56 | AG | 12.615 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48012984 | ss | AG | 13.39 | 83 | GG | 12.975 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34125431 | ss | GG | 125.546 | 363 | TG | 3.107 | AG | 4.425 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131519917 | ds | GG | 55.089 | 157 | AG | 35.764 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56156388 | ds | CC | Un | 129 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355119 | ss | AT | 30.298 | 93 | TT | 3.321 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123439586 | ds | CG | 6.079 | 14 | GG | 0.753 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29657199 | ds | AG | 10.703 | 57 | AA | 0 | GG | 7.473 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:117025571 | ds | CG | 10.846 | 22 | CC | 4.041 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:130144304 | ss | GG | 10.809 | 36 | AG | 9.038 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61348402 | ss | AG | 1.706 | 58 | GG | 13.717 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:929542 | ss | AT | 25.406 | 93 | TT | 7.136 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:1605178 | ss | TG | 19.002 | 85 | GG | 9.73 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:207969 | ss | TG | 102.535 | 558 | GG | 20.988 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132746331 | ss | AA | 4.599 | 11 | AG | 2.17 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136508 | ds | TC | 40.371 | 57 | CC | 84.889 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61451438 | ss | AG | 15.002 | 55 | TG | 0.246 | AT | 1.121 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4541873 | ds | AA | Un | 14 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131577546 | ss | AA | 52.465 | 160 | AT | 3.467 | AG | 1.612 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43366435 | ds | TG | 82.975 | 460 | AT | 17.242 | GG | 8.783 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2670910 | ss | AA | 18.219 | 41 | AG | 0.895 | AT | 0.858 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60873883 | ds | GG | 25.416 | 81 | AG | 19.806 | AA | 43.312 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113336391 | ss | TG | 7.22 | 29 | GG | 2.346 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:70119948 | ss | AT | 10.236 | 42 | TT | 3.78 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012312 | ds | CC | Un | 36 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120723457 | ss | AA | 37.386 | 107 | AG | 3.664 | AT | 1.319 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131484664 | ds | TT | Un | 221 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424809 | ds | CC | Un | 102 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34924447 | ss | AG | 10.265 | 48 | GG | 0.549 | TG | 0.165 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173962 | ss | GG | 11.871 | 34 | TG | 8.404 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31244811 | ss | GG | Un | 21 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173932 | ss | AA | 9.904 | 20 | AG | 4.564 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33418153 | ds | TC | 17.382 | 152 | CC | 5.735 | TT | 39.815 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131974742 | ss | AG | 42.513 | 194 | AT | 0.082 | TG | 2.274 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:107914961 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:16658890 | ss | AT | 5.016 | 17 | TT | 0.461 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60151076 | ss | GG | 216.356 | 797 | TG | 38.332 | AG | 1.394 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr18:50583131 | ss | AA | 4.599 | 11 | AT | 2.17 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61522698 | ss | AG | 28.897 | 205 | AA | 4.603 | AT | 1.604 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120745839 | ss | AG | 43.634 | 202 | GG | 1.686 | TG | 0.054 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93568399 | ss | GG | 204.938 | 571 | TG | 5.476 | AG | 2.055 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52727765 | ss | AG | 14.868 | 74 | GG | 1.234 | TG | 0.584 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:102183586 | ss | TG | 5.029 | 18 | GG | 0.925 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60758800 | ss | AT | 26.283 | 125 | TT | 10.97 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119451304 | ds | AG | 234.243 | 1250 | GG | 7.213 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44374852 | ss | AA | 11.258 | 22 | AT | 5.031 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43874917 | ds | AG | 3.404 | 27 | AA | 2.343 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10767326 | ss | AT | 17.402 | 74 | AA | 7.619 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132739843 | ss | AA | 4.599 | 11 | AT | 2.17 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103204972 | ss | GG | 35.061 | 625 | TG | 83.045 | AG | 0.641 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130980722 | ss | AT | 56.528 | 270 | TG | 0.063 | AG | 3.082 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:103709764 | ss | AG | 2.574 | 17 | AA | 2.35 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52222708 | ss | AG | 17.525 | 107 | GG | 16.85 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2279405 | ss | TG | 31.969 | 145 | GG | 8.092 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67366995 | ss | TG | 38.632 | 174 | AT | 0.062 | AG | 0.106 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:105504384 | ds | AG | 17.879 | 94 | AA | 0 | GG | 108.92 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:6297878 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1047523 | ss | TG | 131.801 | 909 | TT | 83.862 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:47862915 | ss | GG | Un | 21 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:134895012 | ds | TT | 3.157 | 20 | TC | 5.586 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:22980061 | ds | GG | Un | 11 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4889079 | ss | TG | 2.508 | 12 | GG | 0.93 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:20935800 | ss | TG | 8.515 | 29 | TT | 1.404 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100794964 | ss | AG | 27.377 | 133 | GG | 0.801 | TG | 0.642 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33320048 | ss | GG | 26.916 | 114 | TG | 30.407 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378279 | ss | AG | 7.075 | 37 | AA | 4.258 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2659140 | ss | AG | 41.029 | 308 | GG | 19.248 | TG | 0.279 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:99634935 | ss | TG | 77.149 | 393 | TT | 3.823 | AT | 0.084 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:60006709 | ss | TG | 39.052 | 221 | GG | 20.264 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136262 | ss | AT | 37.845 | 191 | TT | 12.876 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112057620 | ss | GG | Un | 26 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51645663 | ss | TG | 1.156 | 55 | TT | 13.281 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47605537 | ss | AG | 45.329 | 232 | TG | 0.232 | AT | 5.198 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:29828459 | ss | TG | 2.082 | 20 | TT | 3.819 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9491798 | ds | GG | 63.459 | 234 | AG | 63.008 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:40326096 | ss | AA | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123376921 | ss | AG | 50.727 | 262 | AA | 0.63 | AT | 0.342 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2870783 | ds | AG | 2.675 | 15 | GG | 0.158 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:95318247 | ss | AT | 10.251 | 31 | TT | 0.468 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144645 | ss | AA | Un | 30 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:120462587 | ss | AG | 5.765 | 24 | TG | 0.112 | AT | 0.388 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450018 | ds | CC | Un | 50 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131879497 | ds | AA | 7.524 | 27 | AG | 6.192 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57470366 | ss | AT | 105.069 | 540 | TT | 3.186 | TG | 0.033 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61463829 | ss | AA | 63.293 | 170 | AT | 40.557 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:28128749 | ds | TT | Un | 266 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:156510422 | ss | AG | 11.252 | 38 | TG | 0.087 | AT | 0.296 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61873385 | ss | AG | 38.266 | 179 | TG | 0.259 | AT | 0.338 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55916404 | ss | AA | 71.733 | 219 | AT | 2.174 | AG | 3.872 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:20935788 | ss | AG | 1.693 | 16 | AA | 0.379 | AT | 0.217 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:16602195 | ss | AG | 4.271 | 25 | GG | 3.297 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123422613 | ss | AA | 39.534 | 126 | AT | 2.004 | AG | 2.471 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67012570 | ss | AG | 4.895 | 32 | GG | 4.743 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67975779 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59889786 | ss | TG | 37.052 | 176 | TT | 9.526 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122036539 | ss | AG | 17.159 | 54 | AA | 2.19 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41728793 | ss | AA | 60.895 | 182 | AT | 1.2 | AG | 3.105 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131669735 | ss | AA | 39.61 | 89 | AT | 20.494 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491707 | ss | AA | 8.48 | 17 | AT | 3.572 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131859966 | ds | GG | Un | 54 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131358770 | ss | GG | 17.476 | 31 | TG | 7.123 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860835 | ss | AA | 2.21 | 11 | AT | 2.26 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44215549 | ss | AG | 18.116 | 57 | TG | 0 | AT | 1.308 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:68735972 | ss | GG | 76.973 | 219 | AG | 3.961 | TG | 1.929 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44374845 | ss | GG | 17.476 | 31 | TG | 7.123 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55405503 | ss | AG | 1.726 | 11 | GG | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:80676771 | ss | AT | 7.258 | 23 | AA | 0.465 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061824 | ds | TG | 115.141 | 171 | CG | 26.655 | TC | 29.074 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:63131982 | ss | AG | 68.931 | 371 | AA | 2.45 | AT | 0.301 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1830797 | ds | TC | 54.585 | 50 | CC | 9.977 | CG | 0.693 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47010051 | ds | TC | 7.272 | 16 | CC | 9.157 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4300822 | ds | CG | 51.747 | 385 | GG | 35.833 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:5024325 | ds | AG | 2.675 | 15 | GG | 0.158 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61844663 | ds | AC | 20.621 | 159 | AA | 19.553 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362250 | ss | TG | 67.189 | 314 | GG | 2.556 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131483774 | ss | AA | 23.565 | 70 | AT | 4.218 | AG | 0.596 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67488064 | ss | TG | 14.656 | 57 | TT | 5.219 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:31790426 | ss | TG | 10.661 | 50 | TT | 6.001 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61189376 | ds | CC | Un | 78 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123395187 | ss | AG | 1.947 | 33 | AA | 7.27 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122684201 | ds | CG | 15.071 | 24 | GG | 6.656 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119507023 | ss | TG | 8.515 | 29 | GG | 1.404 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36497085 | ds | TC | 5.867 | 82 | TT | 2.527 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860714 | ss | AA | Un | 29 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61225424 | ds | GG | Un | 104 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834212 | ss | TG | 49.005 | 286 | TT | 10.691 | AT | 0.172 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27288275 | ss | GG | 12.465 | 29 | TG | 6.968 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26877160 | ds | AG | 10.692 | 147 | AA | 27.116 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55416479 | ss | AG | 91.041 | 678 | GG | 34.187 | TG | 0.335 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26136912 | ss | GG | 7.796 | 16 | TG | 3.349 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:8997198 | ss | AT | 10.413 | 51 | TG | 0.008 | TT | 0.586 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44073099 | ds | TG | 28.665 | 63 | CG | 8.72 | TT | 0.012 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30222121 | ss | TG | Un | 2857 | TT | Un | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59796798 | ss | GG | 29.39 | 61 | AG | 15.059 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136577 | ss | TG | 105 | 573 | GG | 7.159 | AG | 0.095 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56527295 | ss | TG | 34.597 | 145 | GG | 3.977 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:37825521 | ss | AA | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43467997 | ss | TG | 36.381 | 314 | TT | 25.275 | AT | 0.163 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:91062203 | ss | AG | 4.398 | 23 | GG | 0.486 | TG | 0.314 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:32204932 | ss | TG | 3.672 | 19 | TT | 2.037 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:41163634 | ss | AG | 8.754 | 27 | AA | 0.467 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:41006157 | ds | AG | 6.036 | 41 | GG | 3.103 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54636391 | ds | TG | 40.934 | 135 | GG | 6.65 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45848818 | ds | CG | 6.414 | 39 | AC | 11.216 | GG | 0.057 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1254270 | ss | AT | 12.059 | 48 | TG | 0.107 | AG | 0.986 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106237010 | ss | AG | 8.836 | 31 | TG | 0 | AT | 1.071 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:99491880 | ds | AG | 14.55 | 80 | GG | 1.131 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1254531 | ss | TG | 12.452 | 71 | GG | 4.315 | AG | 0.313 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:126197024 | ds | TG | 82.834 | 456 | GG | 0.015 | AT | 0.268 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34926031 | ss | TG | 7.22 | 29 | TT | 2.346 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:9344079 | ss | GG | 26.651 | 44 | TG | 10.139 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131445429 | ss | TG | 4.175 | 14 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61204520 | ss | GG | 5.198 | 12 | TG | 2.418 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60962672 | ss | AA | 27.796 | 61 | AT | 0 | AG | 1.485 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124412 | ss | AG | 23.976 | 78 | GG | 3.793 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:32204948 | ss | TG | 1.255 | 12 | TT | 1.627 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49542370 | ds | CC | Un | 77 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066740 | ss | GG | 15.378 | 28 | TG | 6.43 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131940490 | ds | CG | 44.702 | 289 | GG | 6.421 | AC | 2.652 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:71182645 | ss | GG | Un | 30 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:155405373 | ss | GG | 2.708 | 14 | TG | 3.269 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23286486 | ds | AG | 2.551 | 28 | AA | 3.776 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:17132036 | ss | AA | Un | 27 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59385494 | ss | GG | 81.043 | 227 | TG | 55.226 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693714 | ss | GG | Un | 88 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136613 | ss | AG | 128.293 | 695 | TG | 0.214 | AT | 5.256 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355247 | ss | AA | 39.243 | 88 | AT | 20.267 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164585 | ss | GG | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34243181 | ss | AT | 26.532 | 109 | TT | 10.979 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61760058 | ss | TG | 16.565 | 52 | TT | 1.888 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122487217 | ss | AT | 7.919 | 24 | TT | 0 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5048209 | ss | GG | 146.75 | 421 | TG | 6.544 | AG | 1.842 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21546098 | ds | TT | 73.812 | 763 | TC | 59.55 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31248148 | ss | GG | Un | 62 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124584204 | ds | TC | 48.284 | 545 | CC | 12.418 | TT | 187.411 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377108 | ds | CC | 146.249 | 397 | CG | 92.962 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:3057185 | ss | TG | 39.717 | 172 | TT | 4.106 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:100360216 | ss | AT | 29.325 | 87 | AG | 0.118 | TG | 0.126 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130611326 | ds | AG | 1.435 | 12 | GG | 0.917 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45759609 | ds | TC | 45.223 | 109 | CC | 2.877 | TT | 28.431 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468933 | ss | GG | 102.892 | 332 | TG | 83.72 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36534842 | ss | AG | 24.334 | 81 | TG | 0.123 | AT | 2.319 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131927435 | ds | TT | 3.282 | 30 | TC | 4.756 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68419215 | ss | AA | Un | 29 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:44807481 | ds | TC | 6.529 | 22 | CC | 14.444 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728423 | ss | GG | Un | 26 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1847860 | ss | AT | 10.785 | 60 | TT | 8.305 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56155849 | ds | TC | 3.174 | 47 | TT | 1.868 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:127755894 | ss | AG | 49.597 | 312 | AA | 10.979 | AT | 0.312 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45848713 | ss | AG | 46.107 | 353 | AA | 18.684 | AT | 0.687 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4689710 | ss | GG | 41.206 | 101 | TG | 24.026 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131484732 | ss | AA | 82.035 | 238 | AG | 2.746 | AT | 2.359 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33201610 | ss | TG | 13.013 | 56 | TT | 5.699 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56849390 | ds | GG | Un | 12 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61664682 | ds | TC | 45.041 | 654 | CC | 52.633 | TT | 148.291 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51290870 | ss | AG | 2.508 | 12 | GG | 0.93 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8286929 | ss | TG | 67.748 | 317 | TT | 2.682 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2939700 | ss | TG | 16.971 | 58 | TT | 3.787 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:99634196 | ss | AG | 209.243 | 1218 | AT | 0.035 | TG | 32.027 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124470 | ss | AG | 17.161 | 69 | AA | 2.171 | AT | 0.23 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131974573 | ss | AG | 10.251 | 31 | AA | 0.468 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61522484 | ds | TC | 29.592 | 212 | TT | 14.975 | CC | 61.657 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56155714 | ss | AG | 1.726 | 11 | AA | 1.42 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635678 | ds | AC | 10.18 | 111 | AA | 6.83 | CG | 2.795 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:75801137 | ss | AG | 1.004 | 34 | GG | 1.358 | TG | 0.809 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4541872 | ds | GG | Un | 15 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3697013 | ss | TG | 8.189 | 35 | TT | 3.299 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46439659 | ss | AA | 77.674 | 244 | AT | 0 | AG | 5.197 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146065 | ss | AG | 38.629 | 165 | GG | 0.212 | TG | 0.098 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47810854 | ss | TG | 98.172 | 600 | GG | 42.066 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93568292 | ss | GG | 154.199 | 511 | TG | 18.24 | AG | 1.521 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115430690 | ss | GG | Un | 62 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119009070 | ss | TG | 13.308 | 45 | GG | 2.358 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61692054 | ds | CC | 143.172 | 42 | TC | 4.404 | AC | 8.72 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:91471576 | ss | AG | 2.62 | 18 | TG | 0.136 | AT | 1.304 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60785185 | ss | TG | 42.755 | 239 | TT | 8.706 | AT | 0.178 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56236759 | ds | TC | 4.286 | 632 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:18837022 | ss | TG | 7.873 | 30 | AG | 0.098 | AT | 0.484 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:39402121 | ds | CG | 20.678 | 121 | AC | 161.22 | TG | 19.711 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61496892 | ds | TC | 61.505 | 239 | CC | 32.09 | TT | 40.056 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59796770 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61131294 | ss | TG | 7.652 | 46 | TT | 6.675 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29656609 | ss | TG | 2.836 | 18 | TT | 2.824 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:91071253 | ss | AG | 7.113 | 28 | AT | 0.004 | TG | 0.455 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59796802 | ss | GG | 30.41 | 92 | TG | 3.997 | AG | 0.759 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50875542 | ss | AA | 29.845 | 69 | AT | 16.528 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:17132031 | ss | GG | Un | 24 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:20294178 | ss | GG | Un | 447 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120715956 | ss | AA | 36.208 | 87 | AT | 21.056 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:44782895 | ss | AT | 3.68 | 21 | TT | 0.805 | TG | 0.335 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812678 | ss | AT | 177.191 | 987 | AG | 0.284 | TG | 10.493 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50694689 | ss | AG | 26.98 | 129 | AA | 4.573 | AT | 0.554 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60345353 | ss | AA | 108.312 | 293 | AT | 69.073 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138040 | ss | GG | 9.278 | 24 | TG | 5.746 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:91062940 | ss | AG | 1.726 | 11 | AA | 1.42 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59396532 | ss | TG | 22.759 | 78 | GG | 4.745 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61590319 | ss | GG | 98.001 | 271 | TG | 3.155 | AG | 1.828 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41653245 | ss | AA | 99.226 | 290 | AT | 1.395 | AG | 3.684 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452568 | ds | GG | 163.372 | 499 | AG | 103.199 | CG | 3.302 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46439677 | ss | AA | 96.12 | 265 | AG | 3.136 | AT | 1.818 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59262252 | ss | AA | 5.198 | 12 | AT | 2.418 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424891 | ss | AG | 20.103 | 63 | GG | 2.365 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45848727 | ss | TG | 50.753 | 427 | GG | 29.618 | AG | 0.435 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61204849 | ds | AA | 112.05 | 361 | AG | 4.877 | AT | 6.755 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56850155 | ds | GG | Un | 51 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47495105 | ss | TG | 50.28 | 371 | GG | 47.921 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2136163 | ss | AT | 19.486 | 94 | AA | 11.479 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59369001 | ds | TT | Un | 187 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44073982 | ss | AG | 8.441 | 38 | GG | 3.779 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48584201 | ss | AT | 12.253 | 41 | AG | 0.083 | TG | 0.927 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215206 | ds | CC | 67.408 | 93 | CG | 0 | AC | 27.207 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123477423 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22752130 | ss | AA | 134.566 | 351 | AT | 0 | AG | 2.244 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294194 | ds | CC | 222.985 | 373 | TC | Un | TG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93921683 | ds | CC | 11.662 | 15 | TC | 8.46 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7233610 | ss | GG | 15.604 | 39 | TG | 9.652 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6728387 | ds | AG | 23.783 | 139 | GG | 5.118 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:85790686 | ss | TG | 2.666 | 21 | GG | 3.312 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362251 | ss | TG | 63.752 | 293 | GG | 1.428 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:99877751 | ss | AA | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62185533 | ss | AA | 3.764 | 19 | AT | 4.545 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56397503 | ss | AG | 7.721 | 34 | AT | 0.092 | TG | 2.111 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54401300 | ss | AA | Un | 1109 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131888513 | ds | TT | 184.665 | 12 | TC | 135.055 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119938696 | ss | TG | 4.416 | 20 | AG | 0.125 | AT | 0.613 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61317513 | ss | TG | 46.293 | 197 | TT | 0.476 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:18004920 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60942518 | ds | AA | 131.926 | 80 | AT | 85.456 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:31953555 | ss | AT | 22.585 | 68 | AA | 1.892 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173927 | ss | AG | 1.54 | 20 | AA | 1.013 | AT | 0.245 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130083577 | ss | AG | 63.094 | 307 | GG | 0.226 | TG | 0.128 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56299442 | ds | AG | 1.066 | 16 | GG | 2.43 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138102 | ss | GG | Un | 45 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56156422 | ss | AT | 25.344 | 133 | TT | 18.742 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36996790 | ds | AG | 165.948 | 910 | GG | 10.703 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122635567 | ss | AA | 21.67 | 37 | AG | 8.225 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2399503 | ss | AG | 9.77 | 41 | GG | 3.957 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131395576 | ds | GG | 285.546 | 577 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59384335 | ss | AA | 59.595 | 188 | AT | 4.712 | AG | 1.907 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3162819 | ds | GG | Un | 12 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:99491791 | ds | AC | 33.009 | 51 | CC | 0.935 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61666697 | ds | AA | 28.125 | 99 | AG | 26.881 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33837195 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:32204967 | ss | TG | 3.293 | 13 | GG | 0.965 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94861314 | ss | GG | Un | 41 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61869269 | ss | AA | 50.974 | 120 | AT | 27.601 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52674740 | ss | AA | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55923860 | ss | AG | 1.203 | 15 | AA | 0.685 | AT | 0.442 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611633 | ds | TT | Un | 20 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:63563091 | ss | AG | 3.026 | 49 | GG | 4.624 | TG | 0.446 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29655754 | ss | TG | 91.022 | 445 | AT | 0.049 | AG | 1.175 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:19721067 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21545911 | ds | AA | 109.081 | 355 | AG | 46.851 | AT | 15.735 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54400972 | ds | GG | Un | 76 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132268173 | ds | AG | 143.355 | 789 | GG | 34.948 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12401341 | ss | TG | 3.89 | 34 | GG | 5.723 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33418284 | ds | CG | 50.389 | 196 | CC | 4.793 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4751592 | ss | TG | 32.051 | 121 | TT | 0.475 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130172801 | ds | AG | 1.121 | 26 | GG | 5.396 | AA | 70.184 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:31102712 | ss | GG | 36.325 | 80 | TG | 18.43 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33485801 | ds | AC | 8.017 | 39 | CC | 8.414 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56301761 | ss | AG | 6.118 | 39 | AA | 5.898 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:158910971 | ss | AG | 5.092 | 19 | AA | 1.091 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3022040 | ds | AA | 11.908 | 140 | AG | 39.629 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46684269 | ss | GG | 72.002 | 237 | TG | 7.208 | AG | 2.335 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46565536 | ss | AG | 3.68 | 21 | AA | 0.805 | AT | 0.335 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:107914972 | ss | AA | 5.046 | 17 | AG | 3.998 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52646696 | ss | GG | Un | 66 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040097 | ss | AG | 1.011 | 17 | AA | 3.413 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33524116 | ss | GG | 44.312 | 116 | TG | 27.9 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:168131062 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131483779 | ss | GG | 34.039 | 91 | TG | 2.249 | AG | 1.348 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:16602175 | ss | AG | 10.738 | 38 | GG | 0.152 | TG | 0.103 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491733 | ss | GG | Un | 28 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131432382 | ss | AG | 21.981 | 75 | AA | 1.079 | AT | 0.179 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48003049 | ss | AG | 44.665 | 228 | TG | 0.221 | AT | 5.678 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1776247 | ss | GG | 28.347 | 58 | TG | 13.37 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:37824662 | ss | AG | 73.39 | 393 | AT | 0.209 | TG | 8.742 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36988530 | ss | TG | 112.066 | 637 | GG | 7.91 | AG | 0.271 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23917285 | ss | GG | 30.351 | 81 | TG | 4.537 | AG | 1.038 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54980528 | ss | AA | Un | 79 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93020159 | ss | AG | 9.458 | 41 | AT | 0.284 | AA | 0.004 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:73985654 | ds | TT | 13.496 | 190 | TC | 13.845 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113607258 | ss | AT | 7.274 | 40 | TT | 5.407 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46684617 | ss | AA | 9.904 | 20 | AT | 4.564 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130890925 | ds | TC | 3.958 | 14 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130859547 | ds | CG | 40.403 | 109 | TG | 15.643 | TC | 1.044 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29774919 | ss | TG | 25.952 | 84 | TT | 3.794 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59927649 | ds | TC | 10.118 | 23 | TT | 3.14 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42231632 | ss | GG | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61667251 | ds | CC | 95.604 | 206 | TC | 68.619 | TT | 1.239 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834233 | ss | AG | 68.155 | 379 | GG | 4.431 | TG | 0.336 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:928949 | ss | AT | 1.07 | 21 | AA | 4.386 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36818698 | ss | TG | 5.016 | 17 | TT | 0.461 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33560729 | ss | AA | Un | 21 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136366 | ds | TC | 51.27 | 161 | CC | 49.866 | TT | 26.088 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123467805 | ss | AA | 46.887 | 116 | AG | 27.228 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54760646 | ss | GG | 4.599 | 11 | AG | 2.17 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123495917 | ss | AA | 119.556 | 346 | AG | 6.204 | AT | 1.298 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55367784 | ss | AG | 13.803 | 99 | AA | 7.923 | AT | 0.353 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115430627 | ss | AT | 15.389 | 60 | AA | 1.265 | AG | 0.221 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:102758442 | ss | AA | Un | 21 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600354 | ss | GG | Un | 85 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:31102645 | ds | AG | 38.124 | 221 | AA | 6.72 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49542387 | ds | AA | Un | 24 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:32150634 | ds | GG | Un | 17 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23290239 | ss | AT | 2.166 | 14 | TT | 2.182 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129737440 | ss | TG | 14.897 | 48 | TT | 2.187 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47976604 | ss | AG | 8.5 | 43 | TG | 0.542 | AT | 0.335 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2768797 | ss | AG | 46.805 | 254 | GG | 1.493 | TG | 0.417 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46013536 | ss | GG | 14.625 | 53 | TG | 13.659 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:92489163 | ss | AG | 1.148 | 25 | AA | 5.36 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144368 | ss | GG | 27.866 | 52 | TG | 12.806 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42232471 | ss | AA | 51.814 | 168 | AT | 6.92 | AG | 0.881 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30214127 | ds | AT | 10.837 | 79 | TT | 1.529 | TG | 1.979 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:2994648 | ss | GG | 53.371 | 131 | TG | 0 | AG | 1.816 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:3978073 | ss | AG | 110.794 | 668 | TG | 0.534 | AT | 17.28 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:39000101 | ss | AA | 108.433 | 276 | AT | 63.222 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1900284 | ss | AG | 48.262 | 231 | GG | 2.589 | TG | 0.107 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31245783 | ss | GG | 66.87 | 249 | TG | 13.54 | AG | 1.229 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57467469 | ss | AA | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:127318773 | ss | TG | 8.515 | 29 | TT | 1.404 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173872 | ss | AG | 5.229 | 22 | AA | 1.866 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132167383 | ss | AT | 27.062 | 122 | AA | 14.36 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56155767 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131248655 | ds | AA | 5.805 | 22 | AG | 5.031 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119661655 | ss | GG | 44.928 | 150 | TG | 38.689 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:125777141 | ds | AC | 27.461 | 21 | AT | 2.647 | TC | 0.691 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102875187 | ss | GG | 59.69 | 325 | TG | 88.85 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:202895224 | ss | TG | 1.781 | 15 | GG | 2.376 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123966760 | ss | AA | 28.355 | 76 | AT | 18.791 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:16919136 | ss | AG | 1.726 | 11 | GG | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131577416 | ss | GG | 38.818 | 129 | TG | 6.594 | AG | 1.188 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31248067 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62185227 | ss | GG | 18.875 | 33 | TG | 7.588 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:75211525 | ss | AG | 58.968 | 328 | TG | 0.289 | AT | 10.531 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59368915 | ss | GG | Un | 21 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22752752 | ss | AA | Un | 27 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19141682 | ds | TT | 131.906 | 79 | TC | 24.319 | TG | 4.59 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:87477444 | ss | TG | 49.678 | 224 | AG | 0.033 | AT | 1.371 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22750861 | ds | CC | Un | 17 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138151 | ss | GG | 14.908 | 42 | TG | 10.322 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494909 | ss | GG | 44.238 | 136 | TG | 34.487 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36708275 | ds | AG | 12.493 | 143 | AA | 22.265 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93058017 | ds | CG | 6.422 | 33 | GG | 13.615 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56159513 | ss | AA | 71.269 | 175 | AT | 40.175 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51583861 | ss | GG | 23.922 | 41 | TG | 9.441 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9491718 | ss | TG | 1.726 | 11 | GG | 1.42 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131445451 | ds | TC | 2.341 | 11 | TT | 0.922 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124136013 | ds | GG | 94.194 | 299 | AG | 33.724 | TG | 2.338 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17896894 | ds | AG | 23.198 | 151 | GG | 9.121 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67488431 | ss | AG | 5.092 | 19 | AA | 1.091 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21450778 | ds | TG | 177.843 | 74 | CG | 18.115 | TC | 20.573 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46879059 | ss | AA | 89.301 | 278 | AT | 0 | AG | 5.465 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52714799 | ds | TC | 15.895 | 38 | CC | 9.1 | TT | 5.416 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:148080707 | ss | AG | 2.508 | 12 | GG | 0.93 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131445554 | ds | AG | 4.964 | 65 | GG | 11.277 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:99417532 | ss | GG | Un | 18 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61810559 | ss | TG | 21.677 | 64 | TT | 1.59 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44957321 | ss | AG | 5.98 | 24 | AT | 0 | TG | 0.955 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52625319 | ds | AA | Un | 58 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215261 | ds | AA | Un | 41 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11545042 | ss | GG | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56271471 | ds | TC | 1.33 | 31 | TT | 6.735 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21986082 | ss | AG | 27.301 | 117 | GG | 7.135 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44240050 | ss | AG | 38.588 | 178 | GG | 7.616 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30866736 | ds | AC | 22.075 | 110 | AA | 3.293 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113331519 | ds | AG | 9.371 | 52 | GG | 1.466 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468199 | ds | AG | 7.029 | 82 | GG | 12.484 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131851143 | ds | AA | 64.004 | 42 | AC | 43.161 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860771 | ds | AA | Un | 27 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:77722315 | ds | TT | 18.753 | 79 | TG | 22.589 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18396079 | ss | AA | Un | 27 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61809503 | ss | GG | 2.216 | 12 | TG | 2.776 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123978944 | ds | GG | Un | 44 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50528390 | ss | GG | 22.972 | 38 | TG | 8.46 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154452951 | ds | CC | Un | 23 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51979799 | ds | GG | Un | 104 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:81605313 | ss | TG | 48.117 | 216 | AT | 0.04 | AG | 0.337 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124469 | ss | AT | 20.537 | 72 | AG | 0.148 | TG | 1.362 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:2256648 | ss | GG | 5.198 | 12 | TG | 2.418 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36996850 | ss | AG | 3.825 | 22 | AA | 2.817 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55168795 | ss | AT | 14.748 | 43 | AA | 0.47 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10256937 | ss | GG | 7.796 | 16 | TG | 3.349 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:8997201 | ss | AT | 10.714 | 51 | TT | 6.183 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120196460 | ss | AT | 11.819 | 57 | AA | 1.246 | AG | 0.566 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:43730505 | ss | AT | 3.672 | 19 | AA | 2.037 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611850 | ss | GG | Un | 34 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5245172 | ds | TG | 6.91 | 248 | CG | 40.01 | GG | 8.945 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106761786 | ds | AG | 8.617 | 50 | AA | 1.432 | GG | 53.877 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33066416 | ds | AG | 45.138 | 298 | AA | 18.651 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:149524915 | ss | AA | 161.611 | 461 | AT | 6.699 | AG | 1.586 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52223150 | ss | TG | 16.565 | 52 | TT | 1.888 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21439099 | ds | AG | 13.605 | 75 | AA | 0.473 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61145694 | ss | TG | 33.836 | 156 | TT | 8.57 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33793673 | ds | CC | Un | 13 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:63132492 | ss | TG | 31.737 | 96 | AG | 0 | AT | 1.518 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61462991 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106762616 | ss | AT | 66.239 | 354 | TT | 17.171 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:309668 | ss | AG | 18.812 | 121 | GG | 1.359 | TG | 1.658 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:44407157 | ds | CG | Un | 2297 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94135316 | ds | TC | 27.733 | 101 | TT | 47.144 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61568435 | ss | AG | 25.977 | 93 | TG | 0.308 | AT | 1.494 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29656732 | ss | TG | 8.348 | 27 | TT | 1.101 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:29816095 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:101585229 | ss | AT | 2.482 | 13 | AA | 1.398 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131672167 | ss | AA | 58.98 | 158 | AT | 37.756 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108767765 | ds | GG | Un | 18 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21438151 | ss | TG | 43.374 | 190 | AG | 0.036 | AT | 1.298 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29901183 | ss | GG | 259.522 | 765 | TG | 14.046 | AG | 1.879 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46682167 | ss | AA | 29.739 | 67 | AG | 0.919 | AT | 1.914 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1670254 | ss | GG | 52.707 | 200 | TG | 11.68 | AG | 0.756 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67919646 | ss | GG | 30.213 | 64 | AG | 14.752 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:157814208 | ss | TG | 4.923 | 16 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46878624 | ss | TG | 30.65 | 135 | TT | 7.648 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:164267530 | ss | TG | 2.166 | 14 | TT | 2.182 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:47862916 | ss | GG | Un | 22 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47396492 | ss | TG | 33.964 | 149 | GG | 6.184 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49705888 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67975901 | ss | AT | 9.024 | 32 | AA | 1.877 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377107 | ss | GG | 125.641 | 403 | TG | 100.969 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49818228 | ss | GG | Un | 187 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468087 | ss | AG | 11.842 | 61 | AA | 3.016 | AT | 0.305 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355101 | ss | AG | 14.324 | 51 | GG | 3.61 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62131496 | ss | GG | 19.099 | 88 | AG | 23.403 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:2994734 | ss | GG | Un | 49 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:30502436 | ss | GG | Un | 18 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:126811567 | ss | AG | 23.383 | 106 | GG | 12.436 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12919920 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107047883 | ss | AG | 108.932 | 578 | GG | 2.335 | TG | 0.119 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55982570 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49706431 | ss | AA | Un | 26 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17497701 | ss | AA | 141.047 | 436 | AT | 12.122 | AG | 0.889 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61421934 | ds | CC | Un | 59 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59972906 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:92491166 | ds | AG | 2.712 | 20 | GG | 1.561 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6613711 | ss | AG | 9.502 | 30 | GG | 0.936 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452529 | ds | GG | 157.303 | 455 | AG | 108.707 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4078255 | ss | AG | 3.473 | 23 | AA | 3.3 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:125777009 | ss | AA | 31.304 | 83 | AG | 2.175 | AT | 1.308 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22750067 | ss | AA | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12761239 | ss | AA | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669106 | ss | GG | Un | 50 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47975864 | ss | TG | 1.8 | 54 | GG | 12.421 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61450004 | ss | GG | Un | 22 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26136782 | ss | AG | 10.765 | 57 | AA | 2.809 | AT | 0.436 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146124 | ss | GG | 46.643 | 161 | TG | 41.757 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33066456 | ds | TG | 61.872 | 357 | AT | 0.307 | TT | 9.263 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:5474196 | ss | AG | 55.24 | 289 | TG | 0.376 | AT | 0.531 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132729041 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33201416 | ss | AG | 4.185 | 25 | TG | 0.26 | GG | 0.231 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136316 | ds | AG | 34.461 | 211 | GG | 10.121 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2856313 | ss | AG | 16.328 | 53 | GG | 2.662 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44084617 | ss | AT | 26.692 | 99 | TG | 0.078 | TT | 0.044 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:35582588 | ds | TT | 9.496 | 112 | TC | 10.006 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51554277 | ss | AA | 50.811 | 124 | AT | 0 | AG | 1.331 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48203975 | ss | AT | 3.123 | 55 | AA | 11.851 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116939216 | ds | GG | Un | 60 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138221 | ss | GG | 6.212 | 20 | TG | 4.756 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122037047 | ss | AG | 25.991 | 95 | GG | 7.136 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2939597 | ss | TG | 21.233 | 74 | TT | 4.744 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48890711 | ds | AG | 7.526 | 74 | AA | 9.558 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132073327 | ss | GG | Un | 76 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:91625699 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061881 | ds | TC | 81.236 | 146 | CC | 63.706 | AC | 1.204 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039862 | ds | TT | 122.112 | 296 | TG | 85.13 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38999827 | ss | GG | 80.817 | 238 | TG | 5.57 | AG | 1.141 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:49993338 | ss | AT | 4.077 | 30 | TT | 4.749 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107499714 | ds | AT | 22.254 | 126 | AC | 15.538 | TT | 3.022 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45511338 | ss | AG | 1.241 | 29 | GG | 6.636 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113614530 | ss | AG | 6.929 | 50 | GG | 8.334 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61877330 | ss | GG | 98.568 | 314 | TG | 3.783 | AG | 4.272 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61869379 | ds | TT | 32.525 | 75 | TC | 34.664 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124734424 | ss | TG | 64.767 | 307 | GG | 0.438 | AG | 0.071 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:24921383 | ss | AG | 27.794 | 85 | TG | 0.014 | GG | 0.119 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378305 | ss | AG | 7.032 | 38 | GG | 4.739 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:54789386 | ds | TT | 42.48 | 69 | TC | 17.276 | AT | 3.649 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:45569126 | ss | AG | 25.484 | 85 | AT | 0.212 | TG | 0.984 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119368711 | ss | AG | 39.496 | 190 | GG | 0.696 | TG | 0.214 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61671304 | ds | GG | Un | 51 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131254232 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52898192 | ss | GG | 30.345 | 50 | TG | 11.526 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52223103 | ss | AG | 8.749 | 33 | GG | 2.349 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:71175341 | ss | GG | 30.664 | 56 | AG | 13.457 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44240134 | ds | AG | 37.94 | 248 | GG | 14.822 | AA | 84.288 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123364754 | ss | AG | 63.416 | 329 | GG | 5.728 | TG | 0.109 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:61614824 | ss | TG | 1.255 | 12 | TT | 1.627 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10155537 | ds | CG | 188.163 | 1148 | GG | 15.987 | AC | 6.513 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132742587 | ss | GG | 7.437 | 21 | TG | 4.997 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:126331300 | ds | AA | 4.739 | 18 | AG | 3.816 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164538 | ss | GG | 58.112 | 144 | AG | 34.191 | AA | Un |