Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27125930 | ds | TCCC | 51.689 | 372 | TTCC | 5.199 | CCCC | 54.432 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27133481 | ss | TTTG | 24.811 | 176 | TTGG | 1.035 | TTTT | 30.089 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27156023 | ss | ATTT | 10.959 | 78 | TTTT | 0.588 | AATT | 13.85 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:29816095 | ss | GGGG | Un | 23 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1830526 | ds | AAGG | 26.465 | 834 | AGGG | 46.401 | AAAG | 56.161 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1842882 | ss | AAAG | 5.322 | 154 | AAGG | 13.394 | AAAA | 7.128 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1847860 | ds | ATTT | 16.861 | 161 | TTTT | 6.36 | AATT | 50.764 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1847895 | ds | TTTC | 5.385 | 116 | TTTT | 0.032 | TTCC | 12.101 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1900284 | ss | AAAA | Un | 110 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1975025 | ss | AAAG | 11.125 | 94 | AAGG | 2.4 | AAAA | 12.876 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2279405 | ss | TTGG | 8.255 | 134 | TGGG | 8.181 | TTTG | 7.182 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280104 | ss | GGGG | 48.104 | 318 | AGGG | 2.284 | TGGG | 52.091 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280195 | ss | AATT | 8.094 | 60 | AAAT | 0 | ATTT | 6.655 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:10486182 | ss | AAAA | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:71175341 | ss | GGGG | Un | 49 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153280690 | ds | CCCG | 14.67 | 220 | CCGG | 9.502 | CCCC | 36.356 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153466360 | ds | AGGG | 40.742 | 603 | GGGG | 7.015 | AAGG | 21.172 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:10012670 | ss | TTTG | 5.387 | 47 | TTGG | 0.937 | ATTT | 0.671 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:10208518 | ss | AAAA | Un | 11 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378274 | ss | AATT | 13.764 | 115 | AAAT | 1.455 | ATTT | 3.027 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378305 | ss | AGGG | 8.104 | 98 | AAGG | 4.95 | GGGG | 9.736 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:17343916 | ss | AAAA | Un | 13 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:32746340 | ds | TCCC | 246.231 | 92 | TTCC | 22.339 | ACCC | 2.49 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33066416 | ds | AGGG | 12.123 | 179 | AAGG | 2.228 | GGGG | 28.1 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33320048 | ss | TGGG | 19.855 | 139 | GGGG | 0.473 | TTGG | 24.444 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33418264 | ds | AAAG | 18.951 | 265 | AAGG | 0.986 | AAAA | 46.115 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33418284 | ds | CCCG | 21.411 | 188 | CCGG | 10.802 | CCCC | 51.411 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33524116 | ss | TTTG | 20.696 | 151 | TTTT | 0.26 | ATTT | 1.19 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34125431 | ss | AAGG | 29.422 | 311 | AAAG | 0.268 | AGGG | 12.549 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34191637 | ds | TCCC | 21.352 | 12 | TTCC | 7.673 | CCCC | 50.45 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34242811 | ss | TTTG | 30.199 | 312 | TTGG | 5.008 | TTTT | 0.367 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:21944868 | ss | GGGG | Un | 28 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173932 | ds | TTTT | 7.65 | 26 | TTTG | 11.412 | TTGG | 13.15 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173939 | ds | GGGG | Un | 30 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173962 | ds | CCCC | Un | 39 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:30502416 | ss | GGGG | Un | 15 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:77135234 | ss | AAAT | 6.464 | 47 | AAAA | 0.46 | AATT | 8.038 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:96965616 | ss | AGGG | 11.609 | 82 | GGGG | 0.508 | AAGG | 14.526 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:134893792 | ss | AAAA | Un | 11 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22750067 | ss | AAAA | 25.909 | 98 | AAAT | 19.645 | AATT | 22.56 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22752130 | ss | AGGG | 8.159 | 323 | AAGG | 14.359 | TGGG | 3.188 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22752752 | ss | ATTT | 7.382 | 69 | TTTT | 0.209 | TTTG | 2.613 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22753135 | ds | GGGG | 36.105 | 266 | AGGG | 53.616 | AAGG | 63.604 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491707 | ss | AAAA | 20.224 | 81 | AAAG | 16.278 | AAGG | 18.658 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491733 | ss | GGGG | 21.099 | 92 | TGGG | 18.022 | TTGG | 21.343 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:5403488 | ss | GGGG | Un | 21 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:39111320 | ss | TTGG | 6.454 | 62 | TTTG | 2.032 | ATTG | 0.309 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59311003 | ss | AAGG | 24.956 | 234 | AGGG | 4.873 | AAAG | 4.989 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59320752 | ss | AAAA | Un | 209 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59368915 | ss | TGGG | 6.619 | 48 | TTGG | 0.244 | GGGG | 7.896 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59384335 | ss | AGGG | 34.057 | 453 | GGGG | 0.856 | TGGG | 19.065 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59385494 | ss | TTGG | 31.351 | 443 | TGGG | 11.151 | TTTG | 43.822 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59396532 | ss | TGGG | 5.872 | 61 | GGGG | 3.402 | TTGG | 12.414 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59429798 | ss | GGGG | 14.096 | 70 | AGGG | 13.146 | AAGG | 16.766 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59476720 | ss | TGGG | 8.548 | 173 | GGGG | 16.178 | TTGG | 37.604 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59476732 | ss | AGGG | 18.246 | 193 | AAGG | 4.776 | TGGG | 4.055 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59476748 | ss | AGGG | 18.884 | 169 | GGGG | 2.139 | TGGG | 4.284 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59738176 | ss | AAAG | 5.241 | 122 | AAAT | 0.799 | AATG | 1.54 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59833766 | ss | AAAG | 7.505 | 51 | AAAA | 0.286 | AAGG | 8.524 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59972898 | ss | GGGG | Un | 47 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:60006709 | ss | TGGG | 31.861 | 221 | GGGG | 0.026 | TTGG | 39.684 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:60019835 | ss | ATTT | 10.191 | 71 | AATT | 0.498 | TTTT | 11.074 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:14002596 | ss | GGGG | Un | 18 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:46013837 | ss | TGGG | 18.108 | 130 | TTGG | 1.21 | GGGG | 20.807 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67945580 | ss | AAGG | 6.886 | 169 | AGGG | 11.01 | TGGG | 0.759 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67945627 | ss | TGGG | 17.016 | 215 | GGGG | 7.741 | AGGG | 6.282 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67975779 | ss | GGGG | Un | 24 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67975901 | ss | AATT | 7.603 | 65 | ATTT | 1.693 | AAAT | 0.387 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:86800181 | ss | GGGG | Un | 51 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:100889548 | ss | AATT | 6.246 | 92 | ATTT | 5.705 | AAAT | 4.611 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:130144304 | ss | GGGG | 8.89 | 47 | AGGG | 0 | TGGG | 6.677 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:134582856 | ss | TGGG | 5.703 | 41 | GGGG | 0.095 | TTGG | 7.293 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:135744678 | ss | AAAA | Un | 19 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:68735972 | ss | AAAG | 14.926 | 182 | AAAA | 11.668 | AAGG | 36.922 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728423 | ss | GGGG | Un | 51 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728464 | ss | GGGG | Un | 49 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728477 | ss | GGGG | Un | 30 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132729041 | ds | CCCC | 5.011 | 24 | TCCC | 8.411 | TTCC | 10.139 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132739809 | ss | GGGG | Un | 33 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132739843 | ss | AAAA | Un | 18 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132743227 | ss | GGGG | Un | 13 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132743237 | ss | GGGG | Un | 15 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132746331 | ss | AAAA | 5.144 | 26 | AAAT | 4.426 | AATT | 5.965 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132747056 | ss | GGGG | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132747441 | ss | GGGG | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132750902 | ss | GGGG | Un | 11 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:217512001 | ss | TTGG | 7.194 | 73 | TTTG | 2.61 | ATTG | 0.14 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:55555796 | ss | AAAA | Un | 21 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:75801137 | ss | AGGG | 5.248 | 56 | TGGG | 0.603 | AAGG | 0.715 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:85010722 | ss | GGGG | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:157581614 | ss | TTTG | 46.475 | 611 | TTTT | 16.254 | TTGG | 116.706 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:171557068 | ds | AAAA | Un | 15 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:171558527 | ss | AAAA | Un | 12 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:198037832 | ss | AAAA | Un | 15 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:24894880 | ss | GGGG | Un | 19 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:34735210 | ss | ATTT | 7.577 | 75 | AATT | 2.65 | TTTT | 9.383 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:36764126 | ss | AGGG | 19.902 | 154 | TGGG | 1.301 | GGGG | 0.492 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:63563091 | ss | AAAG | 18.323 | 135 | AAAA | 1.704 | AAGG | 24.002 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:107914961 | ss | GGGG | Un | 22 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154452899 | ds | CCCC | Un | 29 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154452911 | ds | CCCC | Un | 18 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154452973 | ss | GGGG | Un | 28 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:154453146 | ss | GGGG | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:155405373 | ss | GGGG | 29.314 | 135 | AGGG | 27.184 | AAGG | 31.032 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:224143292 | ss | AGGG | 17.029 | 123 | TGGG | 0.163 | AAGG | 0.743 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:5101500 | ss | GGGG | 38.62 | 231 | AGGG | 2.024 | TGGG | 37.704 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:17132031 | ss | GGGG | Un | 98 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:17132036 | ss | AAAA | Un | 112 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33870833 | ss | GGGG | Un | 11 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:83941467 | ss | TTGG | 12.934 | 105 | TGGG | 1.57 | TTTG | 10.49 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:56754175 | ss | TTTG | 28.979 | 288 | ATTT | 0.902 | TTTT | 2.91 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:71182645 | ss | GGGG | 7.381 | 46 | TGGG | 8.472 | TTGG | 10.792 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:99417532 | ss | GGGG | Un | 101 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:164267530 | ss | TTGG | 8.756 | 74 | TGGG | 1.379 | TTTG | 1.085 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:57802 | ss | TGGG | 7.722 | 56 | TTGG | 0.377 | GGGG | 9.119 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:929542 | ss | AATT | 26.812 | 323 | ATTT | 12.712 | AAAT | 5.069 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1525879 | ds | AAAG | 25.107 | 442 | AAGG | 12.813 | AAAA | 59.776 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1525927 | ds | AGGG | 14.025 | 204 | GGGG | 2.073 | AAGG | 37.079 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1619095 | ss | GGGG | Un | 19 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1670254 | ss | GGGG | 63.771 | 471 | TGGG | 8.332 | AGGG | 74.277 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1776247 | ds | CCCC | Un | 11 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1844881 | ss | TGGG | 28.507 | 304 | GGGG | 7.477 | TTGG | 57.485 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1845064 | ds | TGGG | 13.575 | 518 | CGGG | 30.137 | TTGG | 7.786 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2659140 | ss | AAAG | 12.305 | 143 | AAGG | 2.059 | AAAT | 2.688 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2670910 | ss | AAAG | 9.69 | 69 | AAGG | 0.384 | AAAA | 11.647 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2732179 | ss | AAAA | 30.378 | 166 | AAAT | 1.107 | AAAG | 27.506 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2939700 | ss | GGGG | 11.585 | 50 | TGGG | 9.376 | TTGG | 11.526 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:3057185 | ss | GGGG | 44.077 | 274 | TGGG | 4.798 | AGGG | 45.086 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144368 | ss | AGGG | 5.947 | 87 | AAGG | 5.292 | GGGG | 7.022 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144645 | ss | AAAA | 31.253 | 132 | AAAT | 27.444 | AATT | 29.164 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424809 | ds | CCCC | 29.188 | 162 | ACCC | 39.717 | AACC | 44.608 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424891 | ss | AGGG | 12.234 | 94 | AAGG | 1.836 | GGGG | 14.118 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4541872 | ds | CCGG | 11.592 | 46 | CCCG | 13.001 | CGGG | 21.164 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4628449 | ss | TGGG | 16.962 | 128 | GGGG | 1.901 | TTGG | 23.377 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:5474196 | ss | AGGG | 38.117 | 416 | GGGG | 0.789 | TGGG | 4.685 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450489 | ss | AAAT | 33.013 | 326 | AATT | 1.703 | AAAA | 0.291 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450534 | ss | TGGG | 30.379 | 291 | TTGG | 2.159 | GGGG | 48.171 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450575 | ss | AAAG | 38.46 | 404 | AAGG | 2.454 | AAAA | 0.326 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6513590 | ds | TCCC | 12.934 | 180 | CCCC | 2.99 | TTCC | 35.68 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6732520 | ss | TTGG | 5.298 | 47 | TTTG | 1.397 | TGGG | 3.897 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6924169 | ss | AGGG | 30.397 | 296 | AAGG | 2.101 | TGGG | 0.469 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833739 | ss | AAGG | 31.728 | 353 | AAAG | 12.258 | AGGG | 6.644 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833740 | ss | AAGG | 26.367 | 357 | AGGG | 16.531 | ATGG | 0.247 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833781 | ss | AATT | 16.346 | 212 | AAAT | 9.916 | ATTT | 15.518 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833823 | ss | TTGG | 20.014 | 182 | TGGG | 3.44 | TTTG | 18.15 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834212 | ss | GGGG | 61.736 | 337 | TGGG | 69.691 | TTGG | 77.125 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834233 | ss | AAAA | 82.753 | 463 | AAAG | 1.828 | AAAT | 83.953 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8265254 | ss | GGGG | 5.534 | 58 | TGGG | 9.697 | TTGG | 14.181 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9491798 | ds | GGGG | 41.134 | 328 | AGGG | 65.159 | AAGG | 84.829 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9492019 | ss | TGGG | 11.284 | 100 | TTGG | 2.946 | GGGG | 13.125 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9492371 | ss | TGGG | 5.817 | 43 | GGGG | 0.525 | TTGG | 7.359 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10767326 | ss | AATT | 8.567 | 66 | ATTT | 0.746 | AAAT | 6.443 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215443 | ss | TTTG | 14.477 | 155 | TTGG | 6.822 | TTTT | 16.897 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11545042 | ss | GGGG | 95.201 | 718 | TGGG | 12.681 | AGGG | 115.525 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12762366 | ss | TTTG | 92.628 | 1429 | TTGG | 26.072 | ATTT | 12.975 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12919920 | ds | GGGG | 8.344 | 63 | AGGG | 11.908 | AAGG | 14.519 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611850 | ss | GGGG | 17.129 | 68 | TGGG | 13.399 | TTGG | 15.672 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14819261 | ss | AGGG | 5.732 | 76 | GGGG | 5.221 | AAGG | 15.455 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21482055 | ss | TTGG | 9.495 | 75 | TTTG | 0.454 | TGGG | 8.162 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21545736 | ds | TTGG | 13.723 | 1001 | TCGG | 5.506 | CCGG | 46.213 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21545911 | ds | AAAA | 85.153 | 684 | AAAG | 34.216 | AAAC | 2.44 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21546098 | ds | TTGG | 41.377 | 1036 | TCGG | 21.729 | CCGG | 20.234 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21986082 | ss | AAAG | 13.332 | 104 | AAGG | 0.353 | AAAT | 1.568 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:25430583 | ss | GGGG | 19.957 | 102 | TGGG | 19.117 | TTGG | 24.88 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:25430607 | ss | AGGG | 7.378 | 86 | TGGG | 0.668 | AAGG | 0.929 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26166822 | ss | AAAA | 10.42 | 80 | AAAT | 0.654 | AAAG | 10.399 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26877365 | ss | AAGG | 7.726 | 73 | AAAG | 1.565 | AATG | 0.414 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377107 | ds | GGGG | 57.354 | 415 | AGGG | 83.831 | AAGG | 102.776 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377108 | ds | CCCC | Un | 411 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30245242 | ss | AGGG | 7.816 | 67 | GGGG | 2.219 | AAGG | 12.061 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34263113 | ds | CGGG | 8.867 | 228 | CCGG | 0.9 | ACGG | 17.81 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34423551 | ss | AGGG | 16.266 | 153 | AAGG | 2.689 | TGGG | 2.621 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36735147 | ss | GGGG | Un | 11 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36996790 | ds | AGGG | 24.902 | 382 | GGGG | 6.297 | AAGG | 71.345 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:37824662 | ss | AAGG | 13.89 | 121 | AAAG | 2.29 | AGGG | 3.787 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38785614 | ds | AGGG | 5.751 | 119 | GGGG | 5.926 | AAGG | 23.236 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38785906 | ds | TGGG | 42.225 | 697 | TTGG | 21.17 | AGGG | 5.967 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38931524 | ss | ATTT | 5.06 | 83 | AATT | 5.203 | TTTT | 6.444 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38999827 | ss | TTGG | 27.403 | 302 | TTTG | 9.87 | TGGG | 7.938 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38999855 | ss | AAAT | 7.174 | 114 | AATT | 7.349 | AAAA | 8.472 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:39000101 | ss | AATT | 26.567 | 276 | AAAT | 1.795 | ATTT | 31.966 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:39017450 | ss | TTTG | 34.274 | 371 | TTGG | 4.793 | ATTT | 0.941 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42231632 | ss | GGGG | Un | 32 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42232471 | ss | AAAA | 27.389 | 208 | AAAT | 5.371 | AAAG | 28.959 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:43730531 | ss | GGGG | 30.22 | 124 | TGGG | 24.369 | TTGG | 29.38 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:44408767 | ss | AAAA | Un | 11 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:44947546 | ds | AAGG | 6.152 | 109 | AAAG | 2.763 | AGGG | 10.682 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:44948752 | ss | TTTG | 27.097 | 249 | TTTT | 1.254 | ATTT | 1.258 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45051495 | ss | TTTG | 26.923 | 312 | TTGG | 10.211 | TTTT | 40.263 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45759609 | ds | TTTC | 10.456 | 161 | TTCC | 3.533 | TTTT | 24.678 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46439659 | ss | AAAA | 24.278 | 125 | AAAT | 1.802 | AAAG | 18.349 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46682167 | ss | AAAG | 7.696 | 133 | AAGG | 6.21 | AAAT | 2.399 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46786198 | ds | AAAT | 29.269 | 369 | AATT | 5.213 | AAAG | 2.398 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46878624 | ds | CCCG | 16.543 | 249 | CCCC | 2.804 | CCGG | 50.305 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46879059 | ss | AAAA | 56.537 | 303 | AAAT | 62.236 | AATT | 69.077 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362250 | ss | TGGG | 29.698 | 245 | GGGG | 6.234 | TTGG | 46.572 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362251 | ss | TGGG | 30.649 | 244 | GGGG | 5.008 | TTGG | 45.591 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47396490 | ds | AAAC | 14.597 | 19 | AAAT | 1.167 | AAAA | 0.773 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47396492 | ds | AAAC | 15.932 | 21 | AACC | 2.144 | AAAA | 38.624 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47495105 | ss | TTGG | 9.044 | 343 | TGGG | 22.195 | AGGG | 1.932 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47532293 | ds | AGGG | 6.84 | 147 | AAGG | 6.641 | GGGG | 15.981 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47532337 | ds | TCCC | 6.877 | 110 | CCCC | 0.908 | TTCC | 17.887 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47605537 | ss | AGGG | 27.722 | 255 | TGGG | 4.593 | AAGG | 1.62 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48003049 | ss | AAGG | 22.122 | 245 | AAAG | 8.579 | AGGG | 2.721 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48012984 | ss | AAGG | 12.971 | 106 | AGGG | 1.395 | AAAG | 0.648 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635357 | ss | GGGG | Un | 28 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635410 | ss | TGGG | 5.257 | 56 | TTGG | 2.087 | GGGG | 6.584 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49706431 | ss | AAAA | Un | 33 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494908 | ss | AAGG | 17.981 | 235 | AAAG | 10.513 | AATG | 0.162 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494909 | ss | TTGG | 13.38 | 228 | TTTG | 14.426 | TGGG | 12.319 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50548948 | ss | AAAG | 21.524 | 192 | AAGG | 2.189 | AAAT | 3.959 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50580753 | ds | CCCG | 34.536 | 220 | TCCG | 1.595 | TCCC | 0.493 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50716928 | ss | TTGG | 6.403 | 59 | TTTG | 1.367 | TGGG | 5.254 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50875542 | ss | AAAG | 7.799 | 184 | AAGG | 5.172 | AAAT | 1.935 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50925569 | ds | CCCC | 5.421 | 117 | TCCC | 6.132 | CCCG | 1.749 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50930663 | ss | TGGG | 11.703 | 122 | TTGG | 2.742 | AGGG | 2.517 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51047224 | ds | TCCC | 6.951 | 87 | TTCC | 0.673 | CCCC | 15.928 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51281163 | ds | AAAG | 15.559 | 342 | AAGG | 16.068 | AAAA | 6.628 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51554277 | ss | AAAG | 13.025 | 164 | AAGG | 5.043 | AAAT | 3.459 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51734587 | ss | AGGG | 5.46 | 61 | GGGG | 0.43 | TGGG | 3.364 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51979799 | ds | GGGG | 26.808 | 149 | TGGG | 38.988 | TTGG | 44.835 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52180732 | ss | AAGG | 19.876 | 196 | AGGG | 4.959 | AAAG | 4.425 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52375564 | ss | ATTT | 12.976 | 96 | AATT | 1.134 | TTTT | 15.369 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52431253 | ss | AGGG | 6.497 | 48 | GGGG | 0.673 | AAGG | 8.555 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52653957 | ss | AGGG | 8.18 | 127 | GGGG | 1.692 | TGGG | 8.043 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52714799 | ds | TTTC | 9.636 | 49 | TTCC | 3.125 | TTTT | 21.835 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54722187 | ds | CCCG | 12.698 | 19 | CCGG | 6.165 | CCCC | 28.998 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54980528 | ds | AAAA | Un | 122 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55168795 | ss | ATTT | 7.882 | 78 | AATT | 2.918 | TTTT | 9.245 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55916404 | ss | AAAA | 35.081 | 172 | AAAT | 35.077 | AATT | 39.491 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56155767 | ss | GGGG | Un | 43 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56156388 | ds | CCCC | Un | 160 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56156422 | ss | AATT | 20.228 | 174 | AAAT | 2.441 | ATTT | 5.13 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56301761 | ss | AAGG | 8.207 | 74 | AGGG | 1.839 | AAAG | 6.478 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56354838 | ss | AGGG | 21.588 | 211 | AAGG | 7.928 | GGGG | 25.288 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56374004 | ss | TTGG | 11.631 | 146 | TTTG | 6.8 | TGGG | 0.685 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:64409122 | ss | AAAT | 5.662 | 62 | AAAA | 0.705 | AAAG | 2.536 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67366995 | ss | TTTG | 14.796 | 120 | TTTT | 0.88 | ATTT | 2.211 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67919646 | ss | GGGG | 9.437 | 85 | TGGG | 14.459 | TTGG | 21.61 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039779 | ss | TGGG | 7.564 | 58 | TTGG | 0.853 | GGGG | 8.779 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040279 | ds | TTTC | 54.008 | 80 | TTTT | 14.783 | TTCC | 156.169 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68265382 | ss | TTTG | 7.249 | 54 | TTGG | 0.9 | TTTT | 7.872 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68419623 | ss | ATTT | 8.485 | 132 | AATT | 8.457 | TTTT | 10.458 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:74071367 | ds | TCCC | 7.296 | 624 | TTCC | 3.001 | CCCC | 16.358 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75477173 | ss | AAGG | 14.219 | 138 | AGGG | 3.627 | AAAG | 4.01 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75682550 | ss | GGGG | Un | 49 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:88627833 | ss | TTGG | 6.307 | 183 | TGGG | 12.229 | AGGG | 1.167 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93058017 | ds | CCCG | 6.993 | 37 | CCGG | 2.09 | CCCC | 15.706 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93067637 | ss | AGGG | 18.261 | 172 | GGGG | 1.459 | TGGG | 5.823 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93568292 | ss | GGGG | Un | 183 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93568399 | ss | AAAG | 31.276 | 226 | AAAT | 1.004 | AAGG | 0.212 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94776183 | ss | TTGG | 18.818 | 159 | TGGG | 2.086 | TTTG | 16.612 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94860525 | ss | TGGG | 39.694 | 428 | TTGG | 2.999 | GGGG | 71.66 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94861314 | ss | AAAG | 6.084 | 48 | AAAA | 1.34 | AAGG | 8.975 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:97813319 | ss | TTTG | 18.491 | 134 | TTGG | 0.265 | ATTT | 0.944 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100325636 | ss | TGGG | 142.868 | 1849 | TTGG | 3.278 | GGGG | 4.446 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100560436 | ds | TCCC | 10.184 | 176 | TTCC | 7.039 | CCCC | 23.95 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100560577 | ss | AGGG | 27.413 | 189 | AAGG | 0.175 | GGGG | 33.674 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:101868537 | ss | ATTT | 6.16 | 66 | AATT | 2.682 | TTTT | 7.467 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102848278 | ds | AAAG | 10.192 | 230 | AAAA | 13.252 | AAGG | 46.579 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102875187 | ss | GGGG | 28.713 | 433 | TGGG | 20.144 | AGGG | 49.333 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103375653 | ss | TTTG | 56.335 | 747 | TTGG | 11.665 | ATTT | 3.767 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103375700 | ss | AAAT | 17.634 | 201 | AAAA | 11.677 | AATT | 41.224 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103375710 | ss | AAAG | 25.93 | 252 | AAGG | 5.847 | AAAT | 3.584 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:105157699 | ds | TTCC | 6.873 | 38 | TTTC | 1.819 | TCCC | 11.723 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:105504384 | ds | AAGG | 6.005 | 99 | AGGG | 1.184 | AAAG | 10.664 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106762616 | ss | AATT | 30.806 | 373 | AAAT | 4.936 | ATTT | 40.916 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107478953 | ss | AAAA | 6.314 | 42 | AAAG | 7.368 | AAGG | 10.117 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107499714 | ds | AAAT | 19.564 | 209 | AATT | 6.908 | AAAA | 46.843 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107974784 | ss | AAGG | 7.857 | 88 | AAAG | 2.76 | AATG | 0.271 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108636543 | ss | AGGG | 7.138 | 62 | GGGG | 1.866 | AAGG | 11.839 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108755734 | ss | AAGG | 29.251 | 417 | AAAG | 12.84 | AGGG | 5.382 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860570 | ss | AGGG | 13.167 | 107 | GGGG | 0.72 | TGGG | 1.94 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860714 | ds | AAAC | 5.448 | 67 | AACC | 6.162 | AAAA | 13.034 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860835 | ss | AAAG | 9.712 | 96 | AAAT | 1.349 | AAGG | 1.346 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112280949 | ss | AAAT | 13.314 | 99 | AAAG | 0.581 | AATT | 0.238 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115430690 | ss | GGGG | 24.65 | 91 | TGGG | 18.016 | TTGG | 20.953 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116077774 | ss | AAGG | 24.143 | 188 | AAAG | 0.453 | AGGG | 7.288 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116891581 | ss | TTGG | 7.991 | 132 | TGGG | 8.184 | TTTG | 6.928 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116939216 | ds | CGGG | 6.64 | 46 | CCGG | 8.578 | GGGG | 16.562 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:117903986 | ss | TGGG | 6.839 | 62 | TTGG | 1.781 | GGGG | 8.11 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119009070 | ss | TTGG | 5.878 | 62 | TTTG | 2.811 | TGGG | 3.813 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119368674 | ss | AGGG | 13.874 | 126 | TGGG | 2.331 | GGGG | 0.476 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119368711 | ss | AGGG | 24.332 | 177 | AAGG | 1.736 | GGGG | 29.211 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119451304 | ss | AAAG | 62.632 | 913 | AAGG | 11.577 | AAAT | 14.309 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119451349 | ss | TGGG | 60.718 | 784 | TTGG | 10.104 | AGGG | 2.186 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119938640 | ss | AAAA | Un | 13 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120715956 | ss | AAGG | 6.994 | 85 | AGGG | 4.174 | AAAG | 5.268 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120723457 | ss | AATT | 9.854 | 122 | ATTT | 5.458 | AAAT | 8.623 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120745839 | ss | AAGG | 20.312 | 284 | AGGG | 14.377 | AAAG | 19.566 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120811195 | ss | GGGG | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120840753 | ss | TTGG | 6.429 | 107 | TGGG | 6.79 | TTTG | 5.386 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120840818 | ss | AAGG | 8.392 | 88 | AGGG | 3.206 | AAAG | 0.402 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122016971 | ss | TGGG | 11.437 | 161 | GGGG | 12.094 | TTGG | 33.813 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122036539 | ss | AGGG | 7.722 | 56 | AAGG | 0.377 | GGGG | 9.119 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122037047 | ss | AGGG | 11.62 | 95 | AAGG | 2.204 | GGGG | 13.363 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122284254 | ds | TTTC | 14.828 | 19 | TTCC | 24.422 | TTTT | 34.78 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123376921 | ss | AAAA | 29.857 | 205 | AAAT | 3.91 | AAAG | 30.305 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123395187 | ds | TTTT | Un | 15 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123395208 | ds | GGGG | Un | 27 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123422571 | ss | AAAG | 8.531 | 157 | AAGG | 11.155 | AAAA | 11.236 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123477423 | ss | GGGG | Un | 14 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123978944 | ds | GGGG | 18.132 | 145 | AGGG | 28.928 | AAGG | 35.934 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124136013 | ds | GGGG | 64.016 | 355 | TGGG | 1.272 | CGGG | 92.117 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124584149 | ds | CCCG | 21.473 | 596 | CCCC | 21.892 | ACCC | 39.687 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124584158 | ds | AGGG | 16.543 | 483 | GGGG | 37.144 | AAGG | 101.892 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124584204 | ds | TTCC | 7.555 | 706 | TTTC | 1.83 | TCCC | 12.946 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124734424 | ds | TTGG | 7.793 | 106 | TGGG | 0.747 | TTTG | 12.626 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:125777141 | ds | AACC | 7.136 | 31 | AAAC | 5.87 | ACCC | 12.484 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:127755894 | ss | AAAA | 33.174 | 176 | AAAG | 2.542 | AAAT | 29.34 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129189268 | ds | TTCC | 28.096 | 38 | TTTC | 40.2 | TCCC | 59.519 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129213662 | ds | CCGG | 5.01 | 133 | CGGG | 1.343 | TCGG | 1.403 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129388424 | ss | AGGG | 19.777 | 143 | AAGG | 0.253 | TGGG | 0.918 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129869085 | ds | AGGG | 13.416 | 184 | AAGG | 0.295 | GGGG | 32.357 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130083577 | ss | AGGG | 26.466 | 310 | GGGG | 6.004 | TGGG | 13.346 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130138857 | ss | AGGG | 8.008 | 63 | GGGG | 1.119 | AAGG | 11.167 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130142741 | ss | GGGG | Un | 11 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130172879 | ss | GGGG | 17.162 | 67 | TGGG | 13.022 | TTGG | 15.44 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130349880 | ss | GGGG | Un | 20 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130761627 | ss | GGGG | Un | 20 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130829735 | ss | TTTG | 10.169 | 249 | TTTT | 25.282 | TTGG | 54.942 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130859547 | ds | CCGG | 24.389 | 72 | CCCG | 1.685 | CGGG | 45.864 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130980722 | ss | AAAT | 31.65 | 231 | AAAA | 1.356 | AAAG | 1.3 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131169532 | ds | TTTC | 7.908 | 570 | TTTT | 3.327 | TTCC | 24.373 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131204980 | ss | AAAG | 6.373 | 501 | AAAA | 30.544 | AAAT | 32.831 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131358770 | ss | TTTG | 5.319 | 96 | TTTT | 3.109 | ATTT | 5.345 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131395576 | ds | TTTG | 10.704 | 940 | TTGG | 98.511 | TTTT | 31.161 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131406628 | ss | AGGG | 8.327 | 58 | AAGG | 0.262 | GGGG | 9.787 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131432382 | ss | AGGG | 30.549 | 313 | AAGG | 1.962 | TGGG | 3.021 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131440120 | ss | AAGG | 7.367 | 196 | AGGG | 16.291 | AAAG | 6.102 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131466825 | ds | AAAA | Un | 55 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131475953 | ds | AAAA | 29.419 | 199 | AAAG | 40.83 | AAGG | 45.356 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131482881 | ds | AAAA | 35.448 | 271 | AAAG | 54.141 | AAGG | 66.122 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493315 | ds | AACC | 7.399 | 89 | AAAC | 7.284 | ACCC | 12.238 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493873 | ss | AGGG | 7.999 | 76 | TGGG | 0.191 | AAGG | 1.567 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131494175 | ss | AGGG | 12.09 | 90 | TGGG | 0.145 | AAGG | 1.007 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131519917 | ds | GGGG | Un | 81 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131577416 | ss | GGGG | 14.096 | 70 | TGGG | 13.146 | TTGG | 16.766 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131645506 | ds | CCGG | 31.002 | 126 | CGGG | 4.494 | CCCG | 7.153 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131659043 | ss | AGGG | 15.708 | 129 | GGGG | 0.772 | TGGG | 2.66 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131669735 | ss | AGGG | 8.776 | 79 | TGGG | 1.025 | AAGG | 1.186 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131672167 | ss | AGGG | 14.19 | 175 | AAGG | 5.45 | TGGG | 3.644 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131690226 | ss | AGGG | 27.657 | 405 | AAGG | 13.259 | TGGG | 6.799 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131760191 | ds | TTCC | 22.5 | 97 | TCCC | 20.51 | TTTC | 23.517 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131818729 | ds | CCCG | 11.431 | 109 | CCCC | 4.647 | CCGG | 34.679 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131851044 | ds | TCCC | 14.418 | 148 | TTCC | 5.217 | CCCC | 19.096 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131851186 | ss | TGGG | 23.534 | 215 | TTGG | 4.258 | AGGG | 2.857 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131859966 | ds | GGGG | Un | 58 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131875993 | ss | AGGG | 5.352 | 108 | AAGG | 5.327 | TGGG | 1.898 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131879497 | ds | AGGG | 6.819 | 97 | AAGG | 1.274 | GGGG | 15.476 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131888513 | ds | TCCC | 10.778 | 32 | CCCC | 6.483 | CCCG | 1.725 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131924356 | ss | GGGG | 26.09 | 117 | TGGG | 23.782 | TTGG | 26.913 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131974742 | ss | AGGG | 23.775 | 409 | AAGG | 15.067 | TGGG | 6.554 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131994795 | ss | AAGG | 22.336 | 181 | AGGG | 1.361 | AAAG | 20.548 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131995477 | ds | AAAG | 10.605 | 147 | AAGG | 0.626 | AAAA | 24.996 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131995488 | ss | TTGG | 6.121 | 215 | TTTG | 19.36 | TGGG | 5.165 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132073327 | ss | GGGG | 23.361 | 88 | TGGG | 17.563 | TTGG | 20.267 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124469 | ss | AATT | 10.673 | 80 | AAAT | 0 | ATTT | 9.114 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124470 | ss | AAGG | 9.778 | 77 | AAAG | 0.929 | AGGG | 1.367 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132268173 | ds | AGGG | 12.195 | 226 | AAGG | 9.921 | GGGG | 26.553 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:25659293 | ss | AGGG | 5.463 | 49 | TGGG | 0.257 | GGGG | 1.218 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:143017965 | ss | AAAA | Un | 11 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:143017988 | ss | AAAA | Un | 12 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:207969 | ss | TGGG | 30.631 | 296 | TTGG | 1.932 | GGGG | 49.781 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:348507 | ss | AGGG | 9.461 | 85 | GGGG | 3.129 | AAGG | 16.471 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:538456 | ds | AGGG | 5.917 | 118 | AAGG | 4.576 | GGGG | 14.144 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:538542 | ss | GGGG | 19.956 | 90 | TGGG | 17.296 | TTGG | 21.459 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:657132 | ss | AAAT | 7.722 | 56 | AATT | 0.377 | AAAA | 9.119 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:689847 | ss | GGGG | 19.61 | 76 | TGGG | 15.064 | TTGG | 17.511 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:773678 | ss | GGGG | Un | 68 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1047523 | ss | TTGG | 32.381 | 426 | TTTG | 7.786 | TGGG | 14.528 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1194914 | ss | TTGG | 6.169 | 61 | TTTG | 2.348 | TGGG | 4.543 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1254531 | ss | TTTG | 5.637 | 92 | TTGG | 5.982 | TTTT | 7.071 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2030732 | ds | CCCG | 16.293 | 249 | CCGG | 21.288 | CCCC | 41.751 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2136163 | ds | AAAA | Un | 152 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2399503 | ss | AAAA | Un | 45 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2592685 | ds | ACCC | 5.772 | 95 | CCCC | 2.986 | AACC | 19.392 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3162819 | ds | TTGG | 16.715 | 282 | TTTG | 6.357 | TGGG | 30.84 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3589881 | ds | TCCC | 8.002 | 57 | CCCC | 2.656 | TTCC | 23.546 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3680225 | ss | AGGG | 18.167 | 148 | TGGG | 0.358 | GGGG | 3.051 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3706426 | ss | TGGG | 7.788 | 99 | TTGG | 5.404 | GGGG | 8.76 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4614924 | ss | TTGG | 29.396 | 396 | TTTG | 9.844 | TGGG | 38.788 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4751592 | ss | TTTG | 9.601 | 84 | TTGG | 2.45 | TTTT | 10.755 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5245172 | ds | TTTG | 11.071 | 158 | TTGG | 6.745 | TTTT | 25.702 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5934749 | ss | GGGG | Un | 33 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:6141716 | ss | GGGG | 8.067 | 39 | TGGG | 7.51 | TTGG | 8.687 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:6698882 | ds | TTTG | 18.909 | 12 | TTGG | 0.226 | TTTT | 44.989 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:10064212 | ss | AGGG | 5.77 | 41 | GGGG | 0.731 | AAGG | 7.716 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:16503547 | ss | TTTG | 24.064 | 182 | TTGG | 2.519 | TTTT | 28.449 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17244487 | ds | TCCC | 15.259 | 58 | TTCC | 11.639 | CCCC | 34.358 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17497701 | ss | ATTT | 27.965 | 468 | AATT | 17.885 | TTTG | 8.864 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17543329 | ds | AGGG | 16.606 | 234 | AAGG | 1.42 | GGGG | 39.22 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17896894 | ds | AGGG | 8.142 | 114 | GGGG | 1.167 | AAGG | 20.236 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066740 | ss | GGGG | 8.014 | 41 | TGGG | 7.954 | TTGG | 9.441 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066829 | ds | AATT | 11.533 | 38 | AAAT | 6.517 | ATTT | 19.233 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18396079 | ss | AAAA | Un | 14 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18425870 | ss | AAAA | Un | 12 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18436754 | ss | GGGG | 35.058 | 188 | TGGG | 37.706 | TTGG | 44.18 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18516918 | ds | GGGG | Un | 44 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19141682 | ds | TCCC | 10.847 | 44 | TTCC | 8.325 | CCCC | 25.597 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19686581 | ss | GGGG | 28.378 | 105 | TGGG | 21.279 | TTGG | 24.164 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19981242 | ss | AAAT | 5.524 | 113 | AATT | 8.27 | AAAA | 7.315 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:20294178 | ss | AAAG | 16.581 | 215 | AAGG | 6.129 | AAAT | 4.217 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21029357 | ds | TCCC | 15.008 | 449 | CCCC | 35.117 | TTCC | 42.133 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21029455 | ss | TTTG | 27.597 | 235 | TTTT | 3.197 | ATTT | 4.046 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21438151 | ss | TGGG | 26.118 | 255 | TTGG | 4.815 | GGGG | 37.889 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21450317 | ds | AGGG | 7.66 | 146 | GGGG | 6.346 | AAGG | 28.621 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:22662612 | ss | TTGG | 9.503 | 106 | TGGG | 4.635 | TTTG | 7.475 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23349129 | ss | TGGG | 32.718 | 369 | TTGG | 8.166 | GGGG | 54.003 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23917285 | ds | GGGG | Un | 40 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012042 | ds | CCGG | 9.059 | 76 | AACC | 2.505 | ACCG | 0.034 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012312 | ds | AACC | 7.064 | 57 | AAAC | 8.02 | ACCC | 9.773 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012525 | ss | AATT | 17.301 | 160 | AAAT | 3.444 | ATTT | 2.376 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25124101 | ss | AAAT | 33.499 | 461 | AATT | 12.271 | AAAG | 5.193 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26136782 | ss | AAGG | 7.227 | 69 | AGGG | 2.337 | AAAG | 5.233 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26137824 | ss | GGGG | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138065 | ss | AAAG | 6.566 | 51 | AAAA | 1.247 | AAGG | 8.926 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138071 | ss | AAAG | 6.84 | 55 | AAAA | 1.27 | AAGG | 9.81 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138102 | ss | GGGG | Un | 97 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138151 | ss | GGGG | 17.322 | 102 | TGGG | 18.202 | TTGG | 25.381 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225589 | ss | TGGG | 17.814 | 140 | TTGG | 2.751 | GGGG | 20.309 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225962 | ds | AAGG | 6.695 | 233 | AAAG | 15.393 | AGGG | 12.453 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28226024 | ss | TTGG | 6.752 | 91 | TGGG | 4.829 | TTTG | 5.346 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29655754 | ss | TTTG | 28.219 | 324 | TTGG | 10.361 | ATTT | 5.979 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29656771 | ss | AAAG | 5.044 | 52 | AAAA | 2.583 | AAGG | 10.082 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29774919 | ds | CGGG | 12.506 | 12 | CCGG | 3.75 | GGGG | 30.471 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:29901183 | ss | AAAG | 49.242 | 569 | AAGG | 4.186 | AAAA | 1.209 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:31718492 | ss | TTGG | 14.49 | 115 | TGGG | 0.634 | TTTG | 12.955 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33198566 | ss | TGGG | 12.475 | 93 | GGGG | 1.652 | TTGG | 17.385 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33793673 | ds | CCCC | Un | 19 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34523013 | ss | AAAA | Un | 28 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34924447 | ss | AAGG | 6.173 | 57 | AAAG | 1.627 | AATG | 0.208 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34926031 | ds | TTGG | 7.763 | 52 | TGGG | 0.452 | TTTG | 12.114 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:35582588 | ds | TTTT | Un | 158 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:35589783 | ds | AACC | 12.719 | 118 | ACCC | 11.781 | AAAC | 1.127 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36788243 | ss | AATT | 7.023 | 77 | ATTT | 3.257 | AAAT | 5.251 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:39402121 | ds | CCGG | 10.399 | 95 | ACCG | 7.127 | AACC | 20.7 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41653194 | ss | AAAA | 5.707 | 32 | AAAT | 5.929 | AATT | 7.36 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41653245 | ds | AAAA | 21.883 | 168 | AAAG | 33.541 | AAGG | 41.323 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41728793 | ss | AAAA | 35.671 | 193 | AAAT | 38.923 | AATT | 45.332 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42272875 | ss | AGGG | 12.626 | 158 | GGGG | 4.132 | TGGG | 6.237 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812184 | ds | AAGG | 6.614 | 113 | AAAG | 2.408 | AGGG | 10.154 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812678 | ss | AAAT | 7.137 | 769 | AATT | 49.11 | AAAG | 6.752 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812682 | ss | ATTT | 43.683 | 773 | TTTT | 23.939 | TTTG | 21.606 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43022455 | ss | AGGG | 21.966 | 152 | TGGG | 0.285 | GGGG | 0.155 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43160569 | ss | AGGG | 21.442 | 183 | GGGG | 3.735 | TGGG | 1.557 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43366610 | ds | TCCC | 26.364 | 121 | TTCC | 20.749 | CCCC | 62.471 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43532751 | ss | TTTG | 5.978 | 65 | TTTT | 3.604 | TTGG | 13.091 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43973971 | ss | TGGG | 15.096 | 170 | GGGG | 9.601 | TTGG | 34.226 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44033246 | ss | GGGG | Un | 31 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44073099 | ds | TTGG | 6.559 | 57 | TTTG | 2.829 | TGGG | 8.957 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44073982 | ds | AAGG | 5.821 | 127 | AGGG | 4.508 | AAAG | 10.606 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44094106 | ss | ATTT | 5.351 | 49 | AATT | 0.244 | TTTG | 1.126 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44240134 | ds | AGGG | 11.335 | 168 | GGGG | 2.258 | AAGG | 30.786 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45848727 | ss | TGGG | 7.036 | 142 | GGGG | 13.102 | TTGG | 30.172 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:45957838 | ss | GGGG | Un | 12 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46565536 | ss | AAGG | 5.305 | 43 | AGGG | 0.459 | AAAG | 4.263 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46686557 | ss | GGGG | Un | 84 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:47096230 | ss | TTTG | 6.923 | 64 | TTTT | 2.325 | TTGG | 12.119 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48560145 | ds | GGGG | Un | 37 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:48560146 | ds | GGGG | Un | 37 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49054556 | ds | CCCC | Un | 161 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49818228 | ss | AAGG | 15.435 | 254 | AGGG | 14.77 | TGGG | 0.589 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52223150 | ss | TTGG | 7.286 | 61 | TTTG | 1.408 | TGGG | 5.516 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52224383 | ss | TTGG | 9.337 | 65 | TTTG | 0.096 | TGGG | 6.963 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54012250 | ss | TTTG | 31.834 | 319 | TTGG | 2.934 | ATTT | 0.206 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54400972 | ds | GGGG | 16.296 | 132 | AGGG | 16.356 | TGGG | 9.685 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54401300 | ss | AAAA | 31.377 | 128 | AAAG | 25.202 | AAGG | 30.308 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54639551 | ss | AGGG | 6.278 | 57 | TGGG | 0.811 | GGGG | 0.767 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54934339 | ds | TCCC | 6.484 | 1606 | TTCC | 8.442 | CCCC | 15.41 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55660938 | ss | GGGG | Un | 19 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56159513 | ss | AAAA | 18.77 | 86 | AAAG | 16.466 | AAGG | 20.523 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56659485 | ss | TTGG | 30.85 | 379 | TTTG | 5.185 | TGGG | 14.049 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:57201122 | ss | ATTT | 38.941 | 444 | TTTT | 5.326 | TTTG | 1.858 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59889786 | ss | TTGG | 13.964 | 136 | TTTG | 3.628 | TGGG | 12.334 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59936745 | ds | AAGG | 5.777 | 110 | AAAG | 3.702 | AGGG | 8.66 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59988031 | ds | TGGG | 14.899 | 103 | GGGG | 7.306 | TTGG | 47.969 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59988880 | ss | AGGG | 23.902 | 207 | TGGG | 3.02 | GGGG | 1.084 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061824 | ds | TTTG | 67.273 | 200 | TTTC | 0.383 | TTGG | 13.147 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061881 | ds | TTTC | 37.569 | 240 | TTCC | 16.75 | TTTT | 23.154 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60072228 | ds | TTCC | 9.537 | 471 | TCCC | 5.412 | TTTC | 17.969 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60151076 | ss | TTTG | 42.412 | 687 | TTGG | 24.169 | ATTT | 6.134 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60178412 | ds | TCCC | 28.09 | 41 | CCCC | 10.636 | ACCC | 7.149 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60209317 | ds | TCCC | 24.057 | 13 | CCCC | 7.478 | TTCC | 70.404 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294194 | ds | CCCC | 113.609 | 470 | TCCC | 145.956 | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294311 | ds | AAAA | 28.79 | 213 | AAAG | 43.104 | AAGG | 51.792 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294339 | ds | TTTT | 77.648 | 73 | TTTC | 8.166 | TTTG | 115.824 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60345353 | ss | AAGG | 25.168 | 209 | AGGG | 1.81 | AAAG | 7.173 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60345512 | ds | TCCC | 6.591 | 216 | CCCC | 17.145 | TTCC | 23.784 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60403281 | ds | TTGG | 41.202 | 540 | TCGG | 13.288 | TGGG | 4.436 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60403324 | ds | CCGG | 53.729 | 775 | CGGG | 24.738 | CCCG | 8.934 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60483226 | ss | AAAG | 29.48 | 243 | AAGG | 1.275 | AAAT | 5.238 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60785185 | ss | TGGG | 15.448 | 231 | TTGG | 7.775 | AGGG | 4.172 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60785687 | ss | AAGG | 8.326 | 76 | AAAG | 1.838 | AGGG | 6.73 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60984094 | ss | AATT | 29.392 | 293 | AAAT | 7.583 | ATTT | 7.173 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61028351 | ss | AGGG | 26.7 | 383 | TGGG | 11.91 | GGGG | 0.978 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136316 | ds | AAAG | 5.523 | 106 | AAGG | 4.451 | AAAA | 12.226 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136366 | ds | TCCC | 31.435 | 100 | CCCC | 29.991 | ACCC | 8.115 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136508 | ds | TCCC | 45.482 | 13 | TTCC | 3.391 | CCCC | 110.01 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136577 | ss | TTTG | 19.805 | 157 | TTGG | 3.075 | TTTT | 23.37 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136613 | ss | AGGG | 24.359 | 198 | GGGG | 4.663 | AAGG | 37.172 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61145694 | ss | TGGG | 10.052 | 76 | GGGG | 1.498 | TTGG | 13.323 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146065 | ss | AAAG | 7.199 | 158 | AAGG | 5.403 | AAAT | 1.88 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146124 | ss | GGGG | 28.943 | 224 | TGGG | 41.076 | TTGG | 56.717 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61166180 | ds | TCCC | 9.114 | 83 | TTCC | 8.659 | CCCC | 20.76 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61167751 | ds | TCCC | 10.027 | 36 | TTCC | 5.031 | CCCC | 22.189 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61189376 | ds | TCCC | 8.396 | 66 | CCCC | 1.339 | TTCC | 22.117 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61203814 | ds | CCGG | 6.459 | 94 | CGGG | 6.883 | CCCG | 10.972 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61204849 | ss | AAAA | 69.105 | 421 | AAAT | 0 | AAAG | 73.556 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61225424 | ds | GGGG | 12.525 | 121 | AGGG | 23.267 | AAGG | 32.254 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61317513 | ss | TGGG | 9.499 | 118 | TTGG | 6.189 | GGGG | 11.682 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61348402 | ss | AAGG | 5.075 | 42 | AGGG | 0.938 | AAAG | 3.523 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355101 | ss | AGGG | 12.334 | 85 | GGGG | 0.219 | AAGG | 15.164 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355119 | ss | ATTT | 13.966 | 105 | TTTG | 0.835 | TTTT | 0.097 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355247 | ds | TTTT | 12.694 | 34 | TTTC | 18.108 | TTCC | 21.184 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61421934 | ds | CCCC | Un | 34 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61450004 | ss | GGGG | 20.559 | 63 | TGGG | 12.56 | TTGG | 13.641 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452529 | ds | GGGG | 50.033 | 345 | AGGG | 70.636 | AAGG | 80.24 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452568 | ds | GGGG | 112.307 | 735 | AGGG | 23.958 | CGGG | 2.648 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61462991 | ss | GGGG | Un | 47 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61463829 | ss | AAAG | 9.818 | 102 | AAAA | 2.903 | AAAT | 2.146 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61502479 | ss | TGGG | 11.348 | 110 | TTGG | 2.019 | AGGG | 2.159 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61508721 | ss | TTGG | 5.22 | 68 | TTTG | 3.696 | TGGG | 3.785 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61516955 | ss | AAAT | 9.282 | 72 | AATT | 1.362 | AAAA | 10.234 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61522698 | ss | AAGG | 7.562 | 62 | AGGG | 1.404 | AAAG | 0.335 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61523643 | ss | AGGG | 5.77 | 41 | GGGG | 0.731 | AAGG | 7.716 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61529866 | ss | AGGG | 9.476 | 95 | TGGG | 0.071 | AAGG | 1.859 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61554960 | ss | AGGG | 10.418 | 73 | GGGG | 0.455 | AAGG | 13.136 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61562839 | ds | AACC | 7.102 | 125 | AAAC | 6.427 | AACG | 0.148 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61567914 | ss | AAGG | 24.89 | 247 | AAAG | 5.819 | AGGG | 8.02 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61568435 | ss | AGGG | 17.988 | 153 | GGGG | 4.734 | AAGG | 29.074 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61573179 | ss | TTGG | 7.548 | 110 | TGGG | 6.387 | TTTG | 6.107 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61590319 | ss | AAAG | 30.046 | 350 | AAGG | 5.713 | AAAT | 4.467 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61597965 | ss | AAGG | 10.005 | 81 | AGGG | 0.841 | ATGG | 0.087 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61657631 | ds | CCCC | 93.251 | 149 | CCCG | 0 | ACCC | 121.349 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61661919 | ss | TTGG | 19.807 | 172 | TGGG | 2.536 | TTTG | 18.134 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61666697 | ds | AACC | 22.994 | 371 | AAAC | 2.405 | ACCC | 12.987 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61667251 | ds | CCCC | 35.263 | 84 | TCCC | 50.132 | TTCC | 57.769 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669106 | ss | GGGG | Un | 63 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669157 | ss | AGGG | 11.66 | 163 | GGGG | 4.688 | TGGG | 6.944 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61671182 | ds | AGGG | 10.994 | 178 | GGGG | 4.16 | AAGG | 33.62 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61674394 | ss | AGGG | 11.395 | 101 | AAGG | 0.04 | TGGG | 2.512 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61692054 | ds | CCCC | Un | 46 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693682 | ss | AAGG | 8.41 | 79 | AGGG | 2.292 | AAAG | 6.871 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693714 | ss | AAGG | 9.476 | 79 | AAAG | 1.184 | AGGG | 7.717 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61810559 | ss | GGGG | Un | 72 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61844663 | ds | CCCC | Un | 247 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61848793 | ss | AAAG | 9.982 | 92 | AAGG | 1.085 | AAAT | 2.134 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61848808 | ss | AAAG | 10.185 | 78 | AAGG | 1.221 | AAAA | 11.78 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61854240 | ss | TGGG | 22.343 | 160 | TTGG | 1.405 | GGGG | 25.884 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61854753 | ss | TGGG | 25.291 | 204 | TTGG | 4.328 | GGGG | 29.948 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61873385 | ds | AGGG | 10.708 | 165 | GGGG | 3.259 | AAGG | 31.081 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61877330 | ds | TTCC | 6.948 | 28 | TTTC | 1.834 | TCCC | 12.398 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61892066 | ds | AAGG | 10.57 | 239 | AGGG | 8.511 | AAAG | 20.283 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61892524 | ds | TTCC | 23.721 | 29 | TTTC | 14.296 | TCCC | 11.899 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909552 | ss | TTGG | 10.011 | 157 | TTTG | 9.576 | TGGG | 8.483 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909660 | ds | TTCC | 12.298 | 55 | TCCC | 6.009 | TTTC | 23.779 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909667 | ds | TTCC | 7.686 | 60 | TCCC | 12.225 | TTTC | 6.059 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909985 | ss | TTGG | 36.515 | 529 | TGGG | 11.82 | TTTG | 16.289 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61933959 | ss | TGGG | 26.417 | 242 | GGGG | 2.613 | TTGG | 44.151 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61934035 | ss | AGGG | 28.686 | 235 | GGGG | 0.234 | TGGG | 5.75 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164538 | ds | GGGG | Un | 132 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164585 | ss | GGGG | 23.289 | 131 | TGGG | 2.582 | AGGG | 18.365 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62175584 | ds | AACC | 16.731 | 26 | AAAC | 7.075 | ACCC | 31.484 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62204572 | ds | TGGG | 19.551 | 24 | GGGG | 0.308 | CGGG | 2.632 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:1793147 | ss | GGGG | 48.715 | 255 | TGGG | 52.217 | TTGG | 58.433 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:4470457 | ss | GGGG | Un | 14 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31244811 | ss | AAGG | 8.103 | 71 | AGGG | 1.363 | AAAG | 6.728 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31245144 | ss | AAGG | 7.035 | 67 | AGGG | 1.821 | AAAG | 0.537 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31248131 | ds | AAAC | 10.465 | 154 | AACC | 3.121 | AAAG | 0.991 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:40534001 | ss | AAAA | Un | 15 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600319 | ds | CCCC | 8.314 | 32 | TCCC | 12.661 | TTCC | 14.98 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600322 | ds | GGGG | Un | 32 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600354 | ds | CCCC | Un | 12 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:143917817 | ss | GGGG | Un | 12 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:28128749 | ds | TTTT | Un | 475 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30171091 | ss | AAAG | 13.201 | 94 | AAGG | 0.948 | AAAA | 0.065 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30222121 | ss | TTGG | 67.097 | 1047 | TTTG | 11.836 | TGGG | 42.098 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30440163 | ds | AGGG | 5.086 | 83 | AAGG | 1.965 | GGGG | 11.327 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30671684 | ds | TCCC | 11.635 | 20 | TTCC | 4.98 | CCCC | 27.058 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30768941 | ss | GGGG | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:77421990 | ss | GGGG | Un | 49 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:98231771 | ss | GGGG | 10.43 | 46 | AGGG | 8.824 | AAGG | 10.601 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:98231920 | ss | AAAA | Un | 59 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:3978073 | ss | AAAG | 41.949 | 583 | AAGG | 18.484 | AAAA | 76.669 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:3978147 | ss | AGGG | 22.615 | 204 | GGGG | 3.095 | TGGG | 4.297 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:8992042 | ss | GGGG | 8.563 | 28 | AGGG | 5.436 | AAGG | 5.864 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:9344079 | ss | GGGG | Un | 60 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:14172329 | ss | GGGG | Un | 28 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57467469 | ss | AAAG | 13.349 | 497 | AAGG | 26.708 | AAAT | 5.557 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468199 | ds | AGGG | 10.682 | 179 | GGGG | 5.432 | AAGG | 34.033 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468352 | ds | CCCG | 13.044 | 179 | ACCC | 2.125 | CCCC | 1.664 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468933 | ss | TGGG | 34.061 | 351 | GGGG | 3.105 | TTGG | 63.714 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123966760 | ss | AAAA | 44.56 | 248 | AAAT | 2.828 | AAAG | 42.541 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123968066 | ss | TGGG | 11.438 | 84 | TTGG | 0.896 | GGGG | 13.582 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:143331850 | ss | GGGG | Un | 50 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:174666171 | ss | TTTG | 7.417 | 82 | TTTT | 4.509 | TTGG | 16.256 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191061789 | ss | GGGG | Un | 26 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191180357 | ss | TTGG | 9.833 | 160 | TGGG | 7.621 | AGGG | 0.155 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:20598818 | ss | AGGG | 5.77 | 41 | GGGG | 0.731 | AAGG | 7.716 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:70131204 | ss | TTTG | 16.726 | 116 | TTTT | 0.269 | TTGG | 20.483 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:70131215 | ss | AGGG | 9.463 | 66 | AAGG | 0.106 | GGGG | 11.294 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:71414499 | ss | TGGG | 5.701 | 37 | GGGG | 0.245 | TTGG | 6.223 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:87307370 | ss | GGGG | Un | 14 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:87307430 | ss | GGGG | Un | 22 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:87307442 | ss | GGGG | Un | 23 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrY:10635176 | ss | AAAA | Un | 17 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrY:10635208 | ds | GGGG | Un | 11 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrY:10635245 | ds | CCCC | Un | 12 | TTTC | Un | TTCC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrY:10646088 | ss | GGGG | Un | 20 | TTTG | Un | AATG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrY:11945418 | ss | GGGG | Un | 16 | TTTG | Un | AATG | Un |