Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1254292 | ds | CC | Un | 55 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr18:53687108 | ss | AT | 1.726 | 11 | TT | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:71414499 | ss | TG | 4.772 | 15 | TT | 0.158 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50930663 | ss | TG | 17.483 | 61 | GG | 4.264 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2732179 | ss | AA | 35.239 | 81 | AT | 0 | AG | 1.608 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:74071367 | ds | TC | 24.907 | 514 | CC | 0.479 | TT | 183.9 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60403324 | ds | CG | 39.299 | 874 | TG | 113.44 | AC | 39.174 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812184 | ds | AG | 10.943 | 59 | GG | 0.482 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225961 | ds | TC | 8.488 | 529 | CC | 7.687 | TT | 188.304 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112015688 | ds | TT | Un | 87 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41653194 | ss | AA | 4.599 | 11 | AT | 2.17 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:4367786 | ss | GG | 5.934 | 14 | TG | 3.16 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52180732 | ss | AA | 45.03 | 103 | AT | 23.409 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61848793 | ss | AG | 6.168 | 28 | AA | 2.819 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131482881 | ss | AA | 46.442 | 112 | AT | 0 | AG | 1.289 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6472694 | ds | AG | 1.996 | 13 | GG | 0.457 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:10064212 | ss | AG | 5.029 | 18 | AA | 0.925 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31247987 | ss | AA | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129388424 | ss | AG | 32.273 | 137 | TG | 0.158 | AT | 1.437 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61668447 | ss | AT | 1.726 | 11 | TT | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36788243 | ss | AT | 10.726 | 45 | AA | 4.259 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52653957 | ss | AG | 21.487 | 96 | TG | 0.541 | AT | 3.516 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693682 | ss | AG | 5.547 | 30 | GG | 4.077 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44094106 | ss | AT | 13.166 | 38 | TT | 0 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131851186 | ss | TG | 28.334 | 134 | GG | 3.979 | AG | 0.095 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:53052052 | ss | AA | Un | 18 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1847895 | ds | TT | Un | 67 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56452670 | ds | GG | Un | 20 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60565316 | ss | AG | 3.57 | 14 | AA | 1.224 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:689847 | ss | GG | 31.238 | 66 | AG | 15.212 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43022455 | ss | AG | 34.072 | 153 | GG | 2.288 | TG | 0.136 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28226024 | ss | TG | 39.582 | 197 | TT | 11.917 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493315 | ds | AC | 16.852 | 89 | CC | 5.099 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131493873 | ss | AG | 18.543 | 53 | GG | 0.773 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:1793147 | ss | GG | Un | 106 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378274 | ss | AT | 5.014 | 44 | AA | 7.667 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36497049 | ds | CG | 6.594 | 27 | CC | 0.645 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:70131204 | ss | TG | 13.316 | 46 | AT | 0.091 | AG | 0.125 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5244651 | ss | TG | 11.328 | 37 | TT | 1.409 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18436754 | ss | GG | 38.346 | 93 | TG | 22.159 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600322 | ds | GG | Un | 19 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67944736 | ds | TT | 25.353 | 340 | TC | 72.771 | CC | 50.154 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833740 | ss | AG | 46.646 | 241 | GG | 4.298 | TG | 0.213 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1844881 | ss | TG | 49.081 | 241 | GG | 10.005 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191180357 | ss | TG | 12.715 | 44 | AG | 0.17 | AT | 0.561 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19981367 | ss | TG | 11.032 | 39 | GG | 2.354 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131466825 | ds | AA | Un | 18 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106821803 | ds | CG | 4.59 | 25 | GG | 3.723 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:38238293 | ss | AG | 1.726 | 11 | GG | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51686707 | ds | GG | 50.198 | 61 | CG | 40.225 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46686557 | ss | GG | 17.663 | 37 | TG | 8.631 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75682550 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:25430583 | ss | GG | 73.198 | 206 | TG | 50.314 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61674394 | ss | AG | 8.221 | 39 | TG | 0.186 | AT | 2.566 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:39698436 | ss | AG | 4.888 | 26 | AT | 0.239 | TG | 1.002 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59311003 | ss | GG | 44.442 | 114 | AG | 1.296 | TG | 1.126 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47698976 | ss | AG | 12.801 | 43 | TG | 0.172 | AT | 0.556 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:31718894 | ds | TC | 3.459 | 31 | CC | 0.929 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040279 | ds | TT | Un | 71 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1525927 | ds | GG | Un | 165 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280104 | ss | GG | 53.24 | 155 | AG | 38.302 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:12542036 | ss | AG | 4.951 | 21 | GG | 0.261 | TG | 0.271 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34423551 | ss | AG | 21.233 | 74 | AA | 4.744 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22753135 | ds | GG | Un | 88 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68265344 | ss | AG | 3.672 | 19 | GG | 2.037 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3706426 | ss | TG | 9.785 | 34 | TT | 2.179 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131818729 | ds | CG | 7.159 | 47 | AC | 4.92 | CC | 12.01 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:115201317 | ss | AT | 4.175 | 14 | TT | 0 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43532751 | ss | TG | 2.836 | 18 | TT | 2.824 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494908 | ss | AG | 28.213 | 133 | TG | 0.424 | AT | 3.089 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61203814 | ds | CG | 10.11 | 43 | CC | 0.8 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49054556 | ds | CC | Un | 65 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51281287 | ds | TC | 3.787 | 123 | CC | 2.345 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:38353224 | ss | AT | 11.583 | 40 | TG | 0 | AG | 1.156 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600319 | ds | CC | Un | 17 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833823 | ss | TG | 30.766 | 115 | GG | 3.561 | AG | 0.203 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131240218 | ss | AG | 2.784 | 11 | AA | 0.462 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61166180 | ds | TC | 14.028 | 59 | TT | 0.477 | CC | 17.108 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116077774 | ss | AG | 22.971 | 66 | GG | 0.946 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:61830476 | ss | AG | 11.38 | 40 | AA | 2.527 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6613779 | ss | AA | Un | 29 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:37793351 | ds | TG | 3.263 | 21 | AT | 1.793 | AG | 0.178 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59833766 | ss | AA | 10.749 | 49 | AG | 3.588 | AT | 0.806 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51734587 | ss | AG | 14.666 | 47 | GG | 2.058 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:92385604 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52680764 | ss | AG | 4.398 | 23 | GG | 0.486 | TG | 0.314 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:125653762 | ss | AG | 2.166 | 14 | GG | 2.182 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19686164 | ds | TC | 3.73 | 27 | CC | 4.438 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19686581 | ss | GG | 29.39 | 61 | TG | 15.059 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8993842 | ss | GG | 13.715 | 36 | TG | 8.905 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50580753 | ds | CG | 68.214 | 107 | GG | 0.95 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33418264 | ds | AG | 42.315 | 220 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31245144 | ss | GG | 33.415 | 72 | TG | 16.592 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55273746 | ds | AG | 1.586 | 15 | GG | 1.931 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27125930 | ds | TC | 73.729 | 244 | CC | 38.399 | TT | 54.563 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61854240 | ss | TG | 30.528 | 173 | GG | 8.452 | AG | 0.229 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4011137 | ss | GG | 31.425 | 86 | TG | 21.51 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131440120 | ss | AA | Un | 70 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:224143292 | ss | AG | 31.431 | 125 | TG | 0.165 | AT | 0.014 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61028351 | ss | AG | 27.266 | 134 | TG | 0.469 | AT | 4.929 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120840818 | ss | AG | 20.758 | 78 | TG | 0.2 | AT | 2.871 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129869085 | ds | AG | 26.861 | 222 | GG | 18.093 | TG | 0 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039779 | ss | GG | 6.142 | 19 | AG | 4.24 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33148671 | ss | AG | 2.378 | 23 | GG | 0.358 | TG | 0.634 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34125431 | ds | AG | 35.375 | 212 | AA | 8.32 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48012984 | ss | AA | 17.478 | 52 | AT | 1.243 | AG | 1.43 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131519917 | ds | GG | Un | 51 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56156388 | ds | CC | Un | 86 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50716928 | ss | TG | 11.75 | 35 | TT | 0.469 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:98231920 | ss | AA | 23.893 | 44 | AT | 0 | AG | 0.91 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112015282 | ss | GG | Un | 22 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr18:102260 | ds | TG | 4.527 | 12 | TT | 12.641 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:96965616 | ss | GG | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:130144304 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61348402 | ss | AA | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132042947 | ss | AT | 1.726 | 11 | AA | 1.42 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122016971 | ss | TG | 15.427 | 80 | GG | 4.341 | AG | 0.149 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49523069 | ds | CC | Un | 13 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138090 | ss | AA | 5.388 | 22 | AG | 5.334 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909667 | ds | TC | 10.231 | 25 | CC | 0.472 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26877365 | ss | AG | 6.136 | 35 | AT | 0.553 | TG | 0.626 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:134582856 | ss | TG | 3.43 | 12 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4614924 | ss | GG | 50.635 | 196 | TG | 51.468 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61854753 | ss | TG | 38.256 | 169 | AG | 0.038 | AT | 3.188 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153280339 | ds | CC | Un | 22 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61892066 | ds | AG | 15.728 | 113 | GG | 9.15 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131577546 | ss | AG | 16.548 | 53 | TG | 0.073 | AT | 0.735 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:144125911 | ss | AA | 7.104 | 25 | AG | 6.104 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122635620 | ss | AG | 21.404 | 60 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17244487 | ds | TC | 33.277 | 40 | TT | 3.806 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2670910 | ss | AG | 5.547 | 30 | AA | 4.077 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:30815284 | ds | TT | 30.501 | 22 | TC | 30.154 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21545736 | ds | TG | 101.302 | 567 | AT | 0.103 | TT | 15.331 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124092 | ss | AG | 3.43 | 12 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113336391 | ss | TG | 3.449 | 43 | GG | 8.177 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:70119948 | ss | AA | 2.21 | 11 | AT | 2.26 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012312 | ds | AC | 18.239 | 45 | AA | 0.946 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120723457 | ss | AT | 9.238 | 49 | TT | 2.345 | TG | 0.304 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:23385240 | ds | AG | 8.127 | 47 | AA | 1.414 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424809 | ds | CC | Un | 96 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrY:11945418 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34924447 | ss | AG | 5.215 | 31 | AA | 4.258 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54722187 | ds | CG | 13.486 | 18 | CC | 5.699 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173962 | ss | GG | 11.258 | 22 | TG | 5.031 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31244811 | ss | GG | Un | 43 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94466038 | ss | AT | 9.417 | 28 | TT | 0 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119021166 | ds | TT | Un | 60 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:10146954 | ss | TG | 27.447 | 115 | TT | 6.18 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131974742 | ss | AG | 41.949 | 201 | AA | 1.631 | AT | 0.193 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:83941393 | ss | AG | 4.138 | 21 | AA | 2.339 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51900777 | ds | AG | 2.387 | 14 | AA | 0.779 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:20598818 | ss | AG | 13.249 | 39 | GG | 0.47 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:6498748 | ss | AT | 2.508 | 12 | TT | 0.93 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:92385384 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55660920 | ss | GG | Un | 41 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31248131 | ds | CC | Un | 61 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:19981319 | ds | GG | Un | 23 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61522698 | ss | AG | 13.197 | 55 | AT | 0.449 | TG | 0.435 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61463671 | ss | TG | 5.763 | 19 | GG | 0.463 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120745839 | ss | AG | 31.24 | 130 | GG | 4.753 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52727765 | ds | TT | 49.643 | 126 | TG | 39.759 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6513577 | ds | TC | 3.777 | 92 | TT | 8.136 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44374852 | ss | AT | 1.781 | 15 | AA | 2.376 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1845064 | ds | TG | 11.066 | 372 | CG | 52.663 | TT | 1.72 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131406628 | ss | AG | 5.99 | 24 | GG | 1.868 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10767326 | ss | AT | 15.498 | 45 | TT | 0.471 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7916965 | ds | TT | 2.365 | 40 | TC | 3.875 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46013232 | ss | AG | 8.515 | 29 | GG | 1.404 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55660938 | ss | GG | 27.37 | 45 | TG | 10.367 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130980722 | ss | AA | 62.888 | 206 | AT | 8.107 | AG | 1.2 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:206375613 | ss | AG | 3.525 | 13 | AA | 0.46 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2279405 | ss | TG | 25.089 | 77 | AT | 0.068 | AG | 0.365 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61657631 | ds | CC | 106.2 | 206 | TC | 67.679 | CG | 1.545 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67366995 | ss | TG | 23.338 | 70 | GG | 1.893 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:105504384 | ds | AG | 11.436 | 79 | GG | 5.222 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93020255 | ds | TT | 12.144 | 34 | TG | 0 | AT | 4.194 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:47862915 | ss | TG | 3.672 | 19 | TT | 2.037 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103375653 | ss | TG | 111.169 | 835 | TT | 93.666 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:22980061 | ss | TG | 4.912 | 23 | TT | 2.339 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:1194914 | ss | GG | 14.998 | 43 | TG | 10.835 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:8992042 | ss | GG | Un | 30 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56214069 | ss | AG | 20.379 | 75 | GG | 0.472 | TG | 0.31 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4889079 | ss | TG | 2.574 | 17 | TT | 2.35 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30245242 | ss | AG | 6.453 | 27 | AA | 2.343 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50913835 | ss | AT | 10.755 | 40 | TT | 0.077 | TG | 0.116 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33320048 | ss | GG | 11.68 | 87 | TG | 9.296 | AG | 0.7 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52665937 | ss | AG | 4.772 | 15 | AA | 0.158 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2659140 | ss | AG | 30.634 | 137 | GG | 7.056 | TG | 0.247 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51281163 | ds | AG | 23.862 | 146 | AA | 5.707 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:60006709 | ss | TG | 29.31 | 137 | GG | 10.007 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:3852968 | ss | AG | 6.518 | 22 | AA | 0.93 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61136262 | ss | AA | 32.757 | 95 | AT | 23.796 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:36788219 | ss | AT | 10.773 | 35 | TT | 1.408 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:174666171 | ss | TG | 3.43 | 12 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:29828459 | ss | TG | 4.772 | 15 | GG | 0.158 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:9491798 | ds | GG | 84.018 | 267 | AG | 68.764 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833739 | ss | AG | 44.989 | 235 | AA | 6.442 | AT | 0.148 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59360357 | ss | TG | 12.269 | 34 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:31718492 | ss | TG | 2.24 | 35 | GG | 7.243 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635357 | ss | GG | 17.742 | 35 | TG | 0 | AG | 1.245 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123376921 | ss | AA | 43.992 | 134 | AT | 1.073 | AG | 2.733 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012525 | ss | AT | 11.558 | 34 | TT | 0.636 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2870783 | ds | AA | 13.379 | 48 | AG | 12.007 | GG | 38.178 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:538456 | ds | GG | Un | 274 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:75797341 | ss | AG | 10.095 | 39 | AA | 3.001 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27156023 | ss | AT | 11.441 | 46 | AA | 0.855 | AG | 0.121 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635410 | ss | GG | Un | 73 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61892524 | ds | TC | 68.035 | 18 | CC | 11.953 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144645 | ss | AA | Un | 71 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25012491 | ss | AT | 7.727 | 34 | TT | 3.475 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:32746340 | ds | TC | 53.057 | 111 | CC | Un | TG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131879497 | ds | AG | 3.852 | 86 | GG | 15.21 | CG | 0.219 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61463829 | ss | AG | 16.921 | 61 | AT | 0.262 | TG | 0.965 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:28128749 | ds | TT | 5.128 | 295 | TC | 4.564 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59553056 | ds | TC | 4.243 | 15 | TT | 0.466 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61873385 | ss | GG | 45.278 | 108 | TG | 0 | AG | 1.278 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55916404 | ss | AA | 83.42 | 230 | AT | 3.012 | AG | 1.297 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123422613 | ss | AT | 5.959 | 55 | TT | 4.21 | TG | 0.569 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:38931524 | ss | AT | 11.753 | 53 | TT | 5.88 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6450489 | ss | AT | 44.863 | 227 | AA | 3.251 | AG | 0.214 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:134288203 | ss | AA | 2.21 | 11 | AT | 2.26 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132216720 | ss | TG | 1.927 | 23 | TT | 4.313 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67975779 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59889786 | ss | TG | 23.866 | 89 | GG | 7.437 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909660 | ds | TC | 8.892 | 21 | CC | 4.787 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41728793 | ss | AA | 35.81 | 94 | AT | 0 | AG | 1.976 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122036539 | ss | AG | 2.082 | 20 | GG | 3.819 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:99491707 | ss | AA | 5.934 | 14 | AT | 3.16 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131859966 | ds | GG | Un | 38 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860835 | ss | AG | 19.048 | 61 | TG | 0.164 | AT | 0.015 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44374845 | ss | TG | 1.07 | 21 | GG | 4.386 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60072708 | ss | AG | 18.938 | 68 | GG | 4.743 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:80676771 | ss | AT | 4.895 | 32 | AA | 4.743 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061824 | ds | TG | 65.296 | 101 | CG | 15.053 | TC | 28.043 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119368674 | ss | AG | 25.97 | 95 | GG | 2.534 | TG | 0.195 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50925569 | ds | CC | 74.97 | 192 | CG | 3.694 | AC | 31.976 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:61312267 | ds | AC | 14.958 | 18 | CC | 15.717 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362250 | ss | GG | 78.256 | 203 | TG | 47.636 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:24987046 | ss | TG | 8.754 | 27 | GG | 0.467 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:31190792 | ds | TT | 17.199 | 164 | TC | 14.389 | CC | 41.06 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:28225962 | ds | AG | 70.551 | 552 | AA | 60.879 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:31790426 | ss | TG | 6.51 | 21 | TT | 0.464 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61189376 | ds | TC | 11.095 | 49 | CC | 1.892 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43973971 | ss | TG | 29.603 | 84 | GG | 0.947 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123395187 | ds | TT | Un | 12 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909985 | ss | TG | 56.247 | 266 | TT | 1.042 | AT | 0.042 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860714 | ds | AC | 7.067 | 37 | CC | 10.205 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61225424 | ds | GG | 97.831 | 56 | TG | 0 | CG | 15.531 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:66710961 | ss | TG | 5.092 | 19 | TT | 1.091 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834212 | ss | GG | 95.885 | 251 | TG | 58.677 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:55416479 | ss | AG | 42.549 | 292 | GG | 17.091 | TG | 0.018 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12762366 | ss | TG | 192.644 | 1149 | TT | 10.756 | AT | 0.601 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:8997198 | ss | AA | 19.102 | 40 | AT | 9.636 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120811195 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44073099 | ds | TG | 8.596 | 43 | TT | 2.91 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30222121 | ss | TG | 187.608 | 1021 | TT | 10.717 | AT | 0.063 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2769067 | ds | GG | Un | 18 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:22588112 | ds | AG | 1.233 | 14 | GG | 2.159 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56527295 | ss | TG | 11.78 | 46 | TT | 3.782 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:37825521 | ds | TC | 2.41 | 245 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21701913 | ds | TC | 10.229 | 24 | TT | 2.365 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:73777897 | ss | TG | 3.825 | 22 | TT | 2.817 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:105157699 | ds | TC | 14.675 | 104 | CC | 3.575 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:143917817 | ss | GG | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:41006157 | ds | AG | 3.121 | 19 | AA | 0.463 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1952873 | ds | AG | 2.341 | 16 | GG | 0.922 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123965130 | ss | AT | 2.766 | 25 | AA | 4.281 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131169532 | ds | TC | 14.309 | 263 | TT | 3.821 | CC | 90.571 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106237010 | ss | AG | 4.286 | 16 | GG | 0.923 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:16503547 | ss | TG | 32.919 | 134 | AT | 0.053 | AG | 0.108 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:9344079 | ss | GG | 9.278 | 24 | TG | 5.746 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8265254 | ss | GG | 12.465 | 29 | TG | 6.968 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59972898 | ss | GG | Un | 27 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50501369 | ss | TG | 13.09 | 70 | TT | 9.565 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066740 | ss | GG | Un | 32 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124412 | ss | AG | 15.387 | 58 | AT | 0.192 | TG | 0.911 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:71182645 | ss | GG | 13.321 | 25 | TG | 5.725 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59988031 | ds | TG | 22.333 | 53 | GG | 2.193 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:155405373 | ss | GG | Un | 27 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:3978147 | ss | AG | 27.308 | 147 | GG | 7.048 | TG | 0.61 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:2280195 | ss | AT | 3.147 | 27 | TT | 1.536 | TG | 0.39 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7833781 | ss | AT | 43.78 | 192 | TG | 0 | AG | 1.813 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:17132036 | ss | AA | Un | 34 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59385494 | ss | TG | 49.788 | 274 | TT | 19.621 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61693714 | ss | AG | 8.515 | 29 | AA | 1.404 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30214609 | ss | TG | 5.684 | 25 | GG | 2.341 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61355247 | ds | TT | Un | 15 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:57201122 | ss | AT | 53.12 | 239 | TT | 2.38 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635390 | ss | AT | 7.199 | 35 | TT | 0.033 | TG | 0.444 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164585 | ss | GG | 49.48 | 124 | TG | 29.38 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34243181 | ss | AT | 2.524 | 42 | TT | 8.704 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21450317 | ss | AG | 19.237 | 80 | GG | 1.564 | TG | 0.245 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122487217 | ss | AT | 6.751 | 26 | TT | 1.871 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21481888 | ss | AG | 5.763 | 19 | AA | 0.463 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294311 | ds | AA | 224.581 | 162 | AC | 4.729 | AT | 43.785 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59806740 | ds | AA | 3.478 | 15 | AG | 3.384 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7916945 | ds | CC | 5.135 | 44 | TC | 5.986 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31248148 | ds | GG | Un | 77 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21546098 | ds | TG | 111.292 | 622 | AT | 11.25 | GG | 7.061 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52633136 | ss | AG | 4.407 | 29 | AA | 4.262 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131494175 | ss | AG | 14.592 | 49 | TG | 0.01 | GG | 0.095 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:51437168 | ss | TG | 2.166 | 14 | TT | 2.182 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124584204 | ds | TC | 23.111 | 344 | CC | 11.138 | TT | 112.45 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377108 | ds | CC | 91.864 | 261 | AC | 1.65 | CG | 5.324 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:3057185 | ss | GG | Un | 139 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468933 | ss | TG | 38.471 | 164 | AT | 0.047 | AG | 0.206 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45759609 | ds | TC | 19.883 | 103 | CC | 12.94 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:5403488 | ss | GG | Un | 12 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1975025 | ss | AG | 33.375 | 152 | GG | 1.293 | TG | 0.154 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215443 | ds | AC | 6.801 | 23 | CC | 10.761 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129211324 | ss | AT | 5.502 | 21 | TT | 1.395 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:26877278 | ds | TG | 12.819 | 67 | GG | 8.041 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728423 | ss | GG | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:97421942 | ss | AG | 3.57 | 14 | AA | 1.224 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107478953 | ss | AA | 6.603 | 15 | AT | 3.384 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:97813319 | ss | TG | 63.824 | 302 | TT | 0.213 | AT | 0.001 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52641528 | ss | AG | 13.705 | 55 | TG | 0.352 | AT | 1.58 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:24986231 | ds | TG | 5.487 | 11 | TT | 3.244 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:127755894 | ss | AA | 34.521 | 79 | AT | 0 | AG | 1.597 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:78853375 | ss | GG | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21443636 | ss | AT | 7.263 | 24 | TT | 0.931 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33201610 | ss | TG | 3.034 | 20 | TT | 2.823 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62175584 | ds | CC | Un | 14 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61661919 | ss | TG | 19.263 | 106 | TT | 15.672 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2939700 | ss | GG | 25.946 | 43 | AG | 9.904 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124470 | ss | AG | 5.637 | 42 | AA | 2.857 | AT | 0.189 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131814222 | ss | GG | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33618737 | ds | TC | 2.675 | 116 | TT | 0.158 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17543329 | ds | AG | 36.886 | 271 | GG | 14.499 | CG | 0.57 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48635678 | ss | AA | 43.316 | 114 | AT | 27.718 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21481824 | ss | AT | 1.476 | 19 | AA | 3.666 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr14:70131215 | ss | AG | 8.363 | 28 | GG | 0.935 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124381680 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr10:10814830 | ss | AG | 6.331 | 20 | GG | 0.626 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46439659 | ss | AA | 51.024 | 226 | AT | 10.994 | AG | 2.668 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146065 | ss | AA | Un | 109 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61668063 | ds | TC | 2.786 | 114 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47810854 | ss | TG | 59.498 | 334 | GG | 9.528 | AG | 0.073 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93568292 | ss | GG | 71.668 | 185 | TG | 43.488 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108076941 | ss | TG | 1.255 | 12 | GG | 1.627 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59396580 | ss | AA | Un | 26 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61348385 | ss | AA | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:115430690 | ss | GG | 31.963 | 68 | TG | 15.672 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52375564 | ss | AT | 21.165 | 69 | TT | 3.315 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119009070 | ss | GG | 21.67 | 37 | TG | 8.225 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61692054 | ds | CC | 56.66 | 28 | TC | 45.079 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:18185803 | ss | AA | Un | 17 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60785185 | ss | GG | 27.356 | 71 | TG | 3.615 | AG | 1.051 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60178427 | ds | AT | 24.834 | 18 | TT | 59.343 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34242811 | ss | TG | 64.726 | 321 | TT | 9.052 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:25009813 | ds | AG | 10.063 | 74 | GG | 6.229 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:39402121 | ds | CG | 13.485 | 87 | AC | 70.883 | TG | 6.025 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61562839 | ds | AC | 18.05 | 94 | AA | 2.971 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61496892 | ds | TC | 31.962 | 122 | CC | 13.872 | TT | 30.124 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54012250 | ss | TG | 55.481 | 269 | TT | 8.398 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:17132031 | ss | GG | Un | 29 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50875542 | ss | AG | 18.53 | 65 | AT | 0.223 | TG | 1.577 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120715956 | ss | AG | 16.565 | 52 | GG | 1.888 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812678 | ss | AT | 81.881 | 536 | AA | 19.254 | AG | 0.277 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33936186 | ds | TC | 13.304 | 33 | CC | 8.627 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60345353 | ss | AG | 30.944 | 126 | AA | 4.102 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60072228 | ds | TC | 27.771 | 359 | CC | 12.438 | TT | 118.059 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50694689 | ss | AG | 28.244 | 93 | AT | 0.276 | TG | 1.295 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6513590 | ds | TC | 25.42 | 116 | CC | 11.001 | TT | 32.334 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59396532 | ds | CG | 18.576 | 74 | GG | 1.917 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61590319 | ss | AG | 33.789 | 146 | AT | 0.088 | TG | 2.535 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:41653245 | ss | AA | 30.529 | 84 | AG | 1.002 | AT | 1.68 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:45051495 | ds | GG | Un | 19 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61061345 | ds | AG | 6.464 | 67 | AA | 9.082 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452568 | ds | GG | 88.024 | 270 | AG | 44.511 | TG | 4.123 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46439677 | ss | AG | 53.004 | 251 | TG | 0.181 | AT | 0.417 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4424891 | ss | AG | 9.826 | 62 | AA | 9.584 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1525879 | ds | AG | 47.644 | 264 | GG | 3.34 | AA | 12.026 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61204849 | ss | AA | 81.819 | 251 | AT | 4.912 | AG | 2.879 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47495105 | ss | TG | 49.355 | 256 | GG | 14.306 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61597965 | ss | AG | 15.015 | 50 | TG | 0.075 | AT | 0.706 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2136163 | ds | AA | Un | 39 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:172082366 | ss | AG | 1.255 | 12 | GG | 1.627 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44073982 | ds | AG | 4.764 | 44 | AA | 4.738 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130172879 | ss | GG | 20.283 | 35 | TG | 8.051 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48584201 | ss | AT | 5.441 | 29 | TT | 0.944 | TG | 0.315 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215206 | ds | CG | 3.964 | 32 | GG | 4.185 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123422571 | ss | AG | 23.976 | 78 | GG | 3.793 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294194 | ds | CC | 131.284 | 253 | TC | 83.049 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7233610 | ss | GG | 6.603 | 15 | TG | 3.384 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50988730 | ss | AG | 2.082 | 20 | AA | 3.819 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:30259480 | ss | AG | 5.827 | 27 | TG | 0.104 | AT | 1.657 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47362251 | ss | GG | 75.938 | 205 | TG | 48.703 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61573179 | ss | TG | 26.499 | 97 | AT | 0 | AG | 1.528 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49728018 | ds | TC | 1.493 | 21 | CC | 3.299 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56397503 | ss | AG | 4.546 | 33 | AA | 5.231 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54401300 | ss | AA | 117.505 | 329 | AG | 1.573 | AT | 3.265 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131888513 | ds | TC | 29.181 | 24 | CC | 4.119 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52224383 | ss | TG | 6.168 | 28 | GG | 2.819 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131994795 | ss | AG | 54.41 | 256 | AA | 5.714 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93020303 | ds | TT | 5.128 | 42 | TC | 4.564 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61317513 | ss | GG | 36.678 | 85 | TG | 0 | AG | 1.629 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122763052 | ss | AG | 1.693 | 16 | GG | 0.379 | TG | 0.217 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30671669 | ds | GG | 3.155 | 19 | AG | 5.327 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130083577 | ss | AG | 39.302 | 219 | GG | 5.281 | TG | 0.387 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61167751 | ds | TC | 16.988 | 51 | CC | 4.962 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2030732 | ds | CG | 76.62 | 154 | GG | 1.871 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138102 | ss | GG | 16.262 | 44 | TG | 1.658 | AG | 0.638 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122662198 | ss | AG | 4.175 | 14 | AA | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:64409122 | ss | AT | 3.593 | 27 | TT | 4.268 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56156422 | ss | AT | 30.403 | 121 | TT | 3.325 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36996790 | ds | AG | 48.599 | 325 | GG | 22.616 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2399503 | ss | AA | Un | 24 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129189268 | ds | TC | 127.411 | 14 | TT | 26.825 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:538542 | ss | GG | 88.162 | 230 | TG | 53.851 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59928619 | ss | AA | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:32611398 | ds | GG | Un | 30 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131395576 | ds | TG | 40.384 | 443 | TT | 30.625 | AT | 14.795 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55310381 | ss | AG | 3.525 | 13 | AA | 0.46 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59384335 | ss | AG | 44.62 | 252 | TG | 0.636 | AT | 2.703 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:63439540 | ss | GG | 11.053 | 43 | TG | 2.862 | AG | 0.581 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:57412280 | ss | AG | 17.939 | 69 | AT | 0.305 | TG | 2.171 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60178412 | ds | TC | 50.445 | 23 | CC | 36.699 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:99491791 | ds | AC | 16.555 | 20 | CC | 2.047 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61666697 | ds | AC | 47.282 | 260 | CC | 10.462 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:103183667 | ss | AG | 7.47 | 32 | GG | 2.821 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94861314 | ss | AG | 2.836 | 18 | GG | 2.824 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61869269 | ss | AG | 26.821 | 131 | GG | 11.931 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60984094 | ss | AT | 57.862 | 260 | TT | 0.952 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:6141716 | ss | GG | 32.753 | 71 | TG | 16.36 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:34523013 | ss | AA | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611633 | ds | TC | 2.329 | 25 | CC | 1.087 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:47763437 | ss | TG | 4.61 | 24 | TT | 2.816 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:63563091 | ss | AG | 14.958 | 71 | GG | 2.117 | TG | 0.421 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131475953 | ss | AA | 79.752 | 224 | AG | 2.989 | AT | 2.479 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:54400972 | ds | GG | Un | 72 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21545911 | ds | AA | 120.629 | 390 | AG | 27.707 | AT | 16.748 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27133481 | ss | TG | 38.781 | 170 | TT | 4.756 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59738176 | ss | GG | 7.669 | 26 | TG | 6.369 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61567914 | ss | AG | 32.81 | 141 | TG | 0.248 | AT | 0.35 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61589697 | ss | TG | 12.273 | 49 | GG | 4.561 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:44947546 | ds | GG | Un | 64 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr8:7200170 | ss | AG | 24.214 | 81 | AT | 0.196 | TG | 1.478 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46684269 | ds | CG | 5.247 | 54 | AC | 14.926 | AG | 8.556 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131562784 | ds | TC | 5.844 | 58 | TT | 2.829 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52646696 | ds | GG | Un | 55 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68040097 | ss | AA | 13.278 | 41 | AG | 0.734 | AT | 1.511 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49727947 | ss | TG | 6.168 | 28 | GG | 2.819 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51900616 | ds | TC | 17.778 | 61 | CC | 0.477 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60294339 | ds | TT | 122.31 | 34 | TG | 0 | AT | 3.181 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132073406 | ss | TG | 20.701 | 71 | TT | 4.267 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46878294 | ss | AG | 6.479 | 29 | AT | 0.1 | TG | 1.713 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131432382 | ss | GG | Un | 98 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:48003049 | ss | GG | 48.769 | 114 | TG | 26.227 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1776247 | ds | CC | Un | 19 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122284254 | ds | TC | 64.97 | 14 | TT | 1.439 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:27133275 | ds | TC | 2.786 | 146 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:95385739 | ss | AG | 10.755 | 40 | AA | 0.077 | AT | 0.116 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23917285 | ds | GG | 16.858 | 57 | AG | 14.14 | AA | 24.618 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:54980528 | ds | AA | Un | 37 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26137824 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93020159 | ds | GG | 12.931 | 45 | AG | 10.991 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5934749 | ss | GG | 26.249 | 53 | AG | 12.215 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:43047110 | ss | AG | 2.166 | 14 | GG | 2.182 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130859547 | ds | CG | 28.655 | 45 | TG | 8.136 | TC | 2.044 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153235392 | ds | CC | Un | 52 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:208951368 | ss | AA | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59927649 | ds | TC | 22.182 | 360 | CC | 2.85 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61667251 | ds | CC | 59.837 | 48 | TC | 46.258 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129754177 | ss | AG | 2.784 | 11 | GG | 0.462 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42231632 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:7834233 | ss | AA | 122.753 | 338 | AG | 3.339 | AT | 1.46 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123495917 | ss | AA | 41.894 | 135 | AG | 34.631 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55367784 | ds | AG | 1.537 | 38 | AA | 7.702 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18066829 | ds | AT | 9.102 | 15 | AC | 1.235 | AA | 1.644 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:21944868 | ss | GG | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669130 | ss | AG | 5.365 | 35 | GG | 5.227 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:120840753 | ss | TG | 20.786 | 86 | TT | 8.579 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107974784 | ss | AG | 19.973 | 58 | AA | 0.944 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr17:28173939 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59320752 | ss | AA | 126.428 | 373 | AT | 7.669 | AG | 1.721 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:119600354 | ss | GG | Un | 23 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60483226 | ss | AG | 52.913 | 241 | GG | 0.343 | TG | 0.078 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:131258502 | ss | TG | 11.335 | 42 | GG | 2.829 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49542387 | ds | AG | 2.589 | 41 | GG | 7.482 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:32150634 | ds | GG | Un | 15 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47976604 | ss | GG | Un | 23 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123711608 | ds | AC | 15.609 | 23 | CC | 0.954 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61848808 | ss | AG | 3.672 | 19 | AA | 2.037 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:46013536 | ss | GG | Un | 33 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:112280949 | ss | AT | 13.308 | 45 | AA | 2.358 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4144368 | ss | AG | 21.612 | 67 | GG | 2.366 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:42232471 | ss | AA | 52.374 | 185 | AT | 7.472 | AG | 2.038 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30214127 | ss | AT | 22.345 | 73 | AA | 0.569 | AG | 0.164 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:2994648 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:36764126 | ss | AG | 16.996 | 49 | AA | 0.471 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:132728464 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:217512001 | ss | GG | Un | 31 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:2094772 | ds | TC | 1.924 | 206 | TT | 6.212 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1900284 | ss | AA | 57.602 | 162 | AT | 1.568 | AG | 2.21 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31245783 | ss | GG | 53.289 | 175 | TG | 44.831 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57467469 | ss | AG | 76.431 | 506 | GG | 12.77 | TG | 0.686 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132167139 | ss | AG | 7.059 | 32 | AT | 0.095 | TG | 1.759 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132167383 | ss | AT | 16.808 | 81 | TT | 10.036 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:4628449 | ss | GG | 27.269 | 55 | TG | 12.676 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2032041 | ss | TG | 5.99 | 24 | TT | 1.868 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:125777141 | ds | AC | 10.935 | 15 | CC | 4.214 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102875187 | ss | GG | 66.294 | 304 | TG | 22.371 | AG | 0.679 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18516902 | ss | AG | 8.754 | 27 | AA | 0.467 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123966760 | ss | AA | 61.717 | 230 | AT | 60.262 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr6:31248067 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131577416 | ss | GG | 22.4 | 44 | TG | 10.597 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62185227 | ss | GG | 11.031 | 25 | TG | 0 | AG | 1.1 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:59368915 | ss | TG | 10.726 | 45 | GG | 4.259 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43974099 | ss | TG | 17.839 | 57 | GG | 2.664 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:3680225 | ss | AG | 31.35 | 101 | TG | 0.109 | AT | 2.213 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:83941467 | ss | TG | 7.263 | 24 | GG | 0.931 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr1:24894880 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123966392 | ss | TG | 27.835 | 129 | GG | 15.811 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:47868959 | ss | AT | 10.711 | 49 | TT | 5.219 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130895506 | ss | AT | 44.249 | 299 | TT | 15.156 | TG | 0.357 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr2:87477444 | ss | TG | 28.439 | 106 | TT | 1.898 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26138151 | ss | GG | Un | 30 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131995477 | ds | AG | 3.41 | 99 | AA | 22.945 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131851044 | ds | TC | 23.551 | 92 | CC | 8.639 | TT | 22.14 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:70120552 | ds | TC | 5.035 | 39 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50494909 | ss | TG | 33.785 | 133 | TT | 1.425 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:56159513 | ss | AA | Un | 57 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1974912 | ds | AT | 15.037 | 73 | TT | 0.473 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27288789 | ss | AT | 12.55 | 43 | TT | 2.356 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:42812682 | ss | AT | 52.575 | 530 | TT | 90.476 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51583861 | ss | TG | 8.348 | 27 | TT | 1.101 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:108636543 | ss | AG | 15.704 | 57 | TG | 0.241 | AT | 1.154 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:43366610 | ds | TC | 68.616 | 54 | CC | 3.817 | TT | 12.927 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131690226 | ss | AG | 43.711 | 191 | TG | 0.083 | AT | 0.277 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:102848278 | ds | AG | 75.354 | 438 | GG | 13.922 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:17896894 | ds | AG | 2.302 | 54 | GG | 11.622 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124136013 | ds | GG | 74.552 | 247 | AG | 12.036 | TG | 11.306 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51726849 | ss | AG | 2.508 | 12 | AA | 0.93 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131875993 | ss | AG | 14.794 | 96 | AA | 6.958 | AT | 0.173 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:100325636 | ss | TG | 160.342 | 987 | GG | 19.476 | AG | 0.389 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46879059 | ss | AA | 75.514 | 203 | AT | 48.238 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1619095 | ss | GG | Un | 29 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:1842882 | ss | AA | 54.468 | 142 | AG | 1.388 | AT | 0.925 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52714799 | ds | TT | 21.259 | 44 | TC | 11.21 | TG | 3.389 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61671182 | ds | AG | 14.059 | 88 | AA | 3.795 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:32876837 | ss | TG | 2.784 | 11 | TT | 0.462 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr5:99417532 | ss | GG | 19.568 | 34 | AG | 7.824 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61810559 | ss | GG | 30.213 | 64 | TG | 14.752 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44957321 | ss | AG | 5.029 | 18 | GG | 0.925 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52625319 | ss | AT | 20.858 | 65 | TT | 2.365 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11215261 | ss | AG | 10.251 | 31 | GG | 0.468 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:11545042 | ss | GG | inf | 968 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33786261 | ss | TG | 5.99 | 24 | TT | 1.868 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21986082 | ss | AG | 13.308 | 45 | GG | 2.358 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44240050 | ss | AG | 25.038 | 73 | GG | 1.42 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:30866736 | ds | AA | Un | 46 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131814219 | ss | AA | 11.258 | 22 | AG | 5.031 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:16758002 | ss | AG | 4.298 | 18 | AA | 1.559 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18396079 | ss | AA | 5.312 | 13 | AT | 2.915 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123978944 | ds | GG | Un | 75 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50528390 | ss | AG | 5.99 | 24 | AA | 1.868 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:9443379 | ss | TG | 4.772 | 15 | TT | 0.158 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:23279141 | ss | TG | 4.552 | 26 | TT | 3.477 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51979799 | ds | GG | 19.967 | 62 | AG | 14.291 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132124469 | ss | AT | 7.202 | 42 | AA | 5.705 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:657132 | ss | AT | 4.298 | 18 | AA | 1.559 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:36996850 | ss | AA | Un | 45 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116891581 | ss | TG | 16.618 | 72 | TT | 7.62 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191061789 | ss | GG | Un | 16 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122635021 | ss | AT | 14.055 | 65 | TT | 0.455 | TG | 0.583 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:55168795 | ss | AT | 24.482 | 69 | TT | 0.473 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:34385979 | ss | TG | 11.163 | 98 | GG | 18.699 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61664547 | ds | AG | 3.398 | 63 | AA | 12.072 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59988880 | ss | AG | 19.418 | 58 | AA | 1.589 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:123395208 | ds | GG | 5.979 | 29 | AG | 7.97 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:8997201 | ss | AA | 18.149 | 43 | AT | 10.647 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:56525815 | ss | AG | 1.07 | 21 | AA | 4.386 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14611850 | ss | GG | 17.037 | 36 | TG | 8.973 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:5245172 | ds | TG | 2.939 | 144 | CG | 20.61 | AT | 2.814 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:5101500 | ss | GG | Un | 45 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669157 | ss | AG | 5.479 | 48 | GG | 8.645 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106761786 | ds | AG | 4.123 | 35 | GG | 3.843 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33066416 | ds | GG | Un | 113 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10717920 | ds | TC | 12.136 | 50 | CC | 11.467 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:52223150 | ss | TG | 10.773 | 35 | GG | 1.408 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:33793673 | ds | CC | Un | 15 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61462991 | ss | GG | Un | 13 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:106762616 | ss | AT | 60.398 | 292 | TG | 0.043 | AG | 0.615 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18516918 | ss | GG | Un | 22 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46400 | ss | AT | 5.851 | 29 | TT | 3.296 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60403281 | ds | TG | 112.687 | 616 | AT | 47.586 | GG | 6.895 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94135316 | ds | CC | Un | 62 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61568435 | ss | AG | 19.949 | 61 | GG | 2.063 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:93020247 | ds | CC | Un | 40 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr7:29816095 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:34191637 | ss | GG | inf | 920 | AG | 3.648 | TG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21438151 | ss | TG | 32.357 | 157 | GG | 2.9 | AG | 0.262 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:46682167 | ss | AG | 20.103 | 63 | AA | 2.365 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:1670254 | ss | GG | 85.971 | 356 | TG | 94.687 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:2487728 | ss | AA | 27.183 | 51 | AT | 12.264 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:67919646 | ss | GG | Un | 19 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:47862916 | ss | TG | 1.476 | 19 | TT | 3.666 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:59781787 | ss | AG | 4.18 | 18 | AT | 0.118 | AA | 0.015 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:111860703 | ds | TC | 4.709 | 46 | TT | 0 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:67975901 | ss | AT | 14.502 | 41 | AA | 0.169 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49705888 | ss | AG | 5.495 | 23 | TG | 0.053 | GG | 0.204 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr9:100889548 | ss | AT | 12.304 | 44 | AA | 2.831 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:27377107 | ds | GG | 72.954 | 280 | AG | 83.255 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50548948 | ss | AG | 35.125 | 167 | AT | 0.35 | TG | 4.375 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61909552 | ss | TG | 16.691 | 48 | GG | 0.943 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:49818228 | ss | AG | 41.269 | 191 | GG | 2.177 | TG | 0.116 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:39017450 | ss | TG | 56.374 | 265 | TT | 5.238 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:57468087 | ss | AG | 4.138 | 21 | AA | 2.339 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:773678 | ss | GG | Un | 66 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60785687 | ds | TC | 8.737 | 16 | TT | 0.471 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12919920 | ss | GG | 28.08 | 46 | TG | 10.601 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr13:98231771 | ss | GG | Un | 24 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:49706431 | ss | AA | 9.278 | 24 | AT | 5.746 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr19:60053754 | ss | TG | 4.271 | 25 | GG | 3.297 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68419623 | ss | AT | 27.699 | 128 | TT | 2.139 | TG | 0.191 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44033246 | ss | GG | Un | 15 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61421934 | ds | CC | Un | 32 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:4176735 | ss | AG | 6.518 | 22 | GG | 0.93 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30768941 | ss | GG | Un | 81 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61452529 | ds | GG | 134.227 | 192 | TG | 90.773 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:130761627 | ss | GG | Un | 11 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:8076818 | ss | TG | 8.363 | 28 | TT | 0.935 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:6613711 | ss | GG | Un | 32 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18516962 | ss | AT | 12.436 | 42 | AA | 1.883 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:123968066 | ss | TG | 13.915 | 40 | TT | 0 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61508146 | ss | AG | 4.138 | 21 | AA | 2.339 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:191099148 | ds | CC | 3.917 | 75 | TC | 9.052 | TT | 5.969 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:18496056 | ss | GG | Un | 18 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131924356 | ds | CC | 46.174 | 13 | TC | 33.553 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94776183 | ss | TG | 17.968 | 76 | GG | 7.618 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr15:22750067 | ss | AA | 29.504 | 48 | AT | 11.063 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61669106 | ss | GG | Un | 40 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:12761239 | ss | AA | 5.198 | 12 | AT | 2.418 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61450004 | ss | GG | 19.568 | 34 | TG | 7.824 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:50938875 | ss | AT | 3.57 | 14 | TT | 1.224 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:26136782 | ss | AG | 8.234 | 71 | AT | 0.576 | AA | 1.216 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61146124 | ss | GG | 44.174 | 141 | TG | 35.826 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:33066456 | ds | GG | 85.247 | 154 | CG | 64.184 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:5474196 | ss | AG | 57.943 | 294 | GG | 12.092 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr16:33201416 | ss | GG | 5.198 | 12 | AG | 2.418 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61508721 | ss | TG | 10.251 | 31 | TT | 0.468 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:129213662 | ds | CG | 30.958 | 192 | GG | 12.554 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44084617 | ss | AT | 28.363 | 84 | AA | 1.895 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:35582588 | ds | TT | 33.998 | 94 | TC | 32.624 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:21029357 | ds | TC | 28.336 | 203 | CC | 56.095 | TT | 34.319 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:113363455 | ds | AG | 1.158 | 13 | AA | 1.942 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:52711139 | ss | GG | Un | 14 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:51554277 | ss | AG | 29.914 | 131 | TG | 0.306 | AT | 0.098 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:116939216 | ds | GG | Un | 45 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:122037047 | ss | AG | 9.077 | 46 | GG | 5.702 | AA | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chrX:153466360 | ds | AG | 25.638 | 247 | AA | 34.05 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:132073327 | ss | GG | Un | 48 | TG | Un | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60061881 | ds | TT | 136.758 | 131 | TC | 126.822 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:94860525 | ss | TG | 68.783 | 363 | GG | 15.736 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:68039862 | ds | TT | Un | 91 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:22662612 | ss | TG | 12.546 | 48 | TT | 3.783 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:107499714 | ds | AT | 17.481 | 107 | TG | 4.212 | TT | 5.732 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:21482055 | ss | TG | 19.794 | 87 | TT | 9.728 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:14819261 | ss | AG | 12.801 | 43 | AT | 0.172 | TG | 0.556 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61877330 | ss | AG | 17.869 | 73 | AA | 0.07 | AT | 0.484 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61869379 | ds | TC | 3.56 | 52 | TT | 6.887 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:124734424 | ds | TG | 11.135 | 67 | AT | 0.874 | AG | 0.437 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr21:14378305 | ss | AG | 4.755 | 36 | AA | 0.96 | AT | 0.412 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr3:45569126 | ss | GG | 20.283 | 35 | TG | 8.051 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:36064958 | ss | TG | 2.166 | 14 | TT | 2.182 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:57200438 | ss | TG | 2.464 | 36 | TT | 7.435 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:61671304 | ds | AG | 9.135 | 47 | AA | 0 | GG | 204.488 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:60415894 | ss | TG | 11.72 | 51 | TT | 5.219 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:119451349 | ss | TG | 146.246 | 754 | AT | 0.068 | AG | 1.49 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr11:71175341 | ss | GG | 20.283 | 35 | TG | 8.051 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr4:174666228 | ss | TG | 2.836 | 18 | GG | 2.824 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr22:30671684 | ds | TC | 3.44 | 12 | TT | 15.164 | CC | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:44240134 | ds | AG | 15.116 | 104 | GG | 7.704 | AA | 49.473 |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:43730531 | ss | GG | 17.564 | 32 | TG | 7.36 | TT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:47096230 | ss | TG | 17.159 | 54 | TT | 2.19 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:10155537 | ds | CC | Un | 452 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:131562835 | ds | TT | Un | 65 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr20:62164538 | ds | GG | Un | 123 | TG | Un | AT | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:126331300 | ds | AG | 2.341 | 16 | AA | 0.922 | GG | Un |
Chr Coord | Strands Used For SNP Call | Best Genotype | Log10 Odds First Choice / Second Choice | Read Number | Second Best Genotype | Log10 Odds Second Choice / Third Choice | Third Best Genotype | Log10 Odds Third Choice / Fourth Choice |
chr12:15265659 | ds | AG | 2.024 | 16 | AA | 1.439 | GG | 43.397 |